RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF577Q9BSK1 485 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 NENFQ9UMX5 172 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 APBA3O96018 575 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 STAT1P42224 750 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 HDLBPQ00341 1268 aaKnown RBP27.81■■■□□ 2.04
RAB40C-201ENST00000248139 C10orf76Q5T2E6 689 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 RNPC3Q96LT9 517 aaKnown RBP27.81■■■□□ 2.04
RAB40C-201ENST00000248139 AGPAT3Q9NRZ7 376 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 PLAAQ9Y263 795 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 BTNL10A8MVZ5 291 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 PIK3CDO00329 1044 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 EIF3HO15372 352 aaKnown RBP eCLIP27.81■■■□□ 2.04
RAB40C-201ENST00000248139 DLG4P78352 724 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 ZSWIM2Q8NEG5 633 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 TRIM31Q9BZY9 425 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 PPP1R9AQ9ULJ8 1098 aa27.81■■■□□ 2.04
RAB40C-201ENST00000248139 BUB1BO60566 1050 aaPredicted RBP27.8■■■□□ 2.04
RAB40C-201ENST00000248139 PRELPP51888 382 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 PRPF4BQ13523 1007 aaKnown RBP27.8■■■□□ 2.04
RAB40C-201ENST00000248139 CC2D2BQ6DHV5 1058 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 VPS36Q86VN1 386 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 SLC35G2Q8TBE7 412 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 ARHGEF26Q96DR7 871 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 GPR88Q9GZN0 384 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 TAF1DQ9H5J8 278 aaPredicted RBP27.8■■■□□ 2.04
RAB40C-201ENST00000248139 ZBTB21Q9ULJ3 1066 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 PGRMC1O00264 195 aaKnown RBP27.8■■■□□ 2.04
RAB40C-201ENST00000248139 GAP43P17677 238 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 SOX5P35711 763 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 CEP55Q53EZ4 464 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 CEP85LQ5SZL2 805 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 MCTP2Q6DN12 878 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 NT5DC3Q86UY8 548 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 SLC5A5Q92911 643 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 LXNQ9BS40 222 aa27.8■■■□□ 2.04
RAB40C-201ENST00000248139 ZBTB12Q9Y330 459 aaPredicted RBP27.8■■■□□ 2.04
RAB40C-201ENST00000248139 TUFT1Q9NNX1 390 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 TTI1O43156 1089 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 DAPK3O43293 454 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 RAD17O75943 681 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 SYCP3Q8IZU3 236 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 PBKQ96KB5 322 aa27.79■■■□□ 2.04
RAB40C-201ENST00000248139 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.79■■■□□ 2.04
RAB40C-201ENST00000248139 TMEM150BA6NC51 233 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 FERP16591 822 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 PPP2R5CQ13362 524 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 ZNF211Q13398 564 aaPredicted RBP27.78■■■□□ 2.04
RAB40C-201ENST00000248139 PHLDB3Q6NSJ2 640 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 ACTRT1Q8TDG2 376 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 DPH5Q9H2P9 285 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 STXBP5LQ9Y2K9 1186 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 PPIP5K2O43314 1243 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 EXOC3O60645 756 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 IFI16Q16666 785 aaKnown RBP27.78■■■□□ 2.04
RAB40C-201ENST00000248139 HS2ST1Q7LGA3 356 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 DAW1Q8N136 415 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 SLC30A5Q8TAD4 765 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 INTS2Q9H0H0 1204 aaKnown RBP27.78■■■□□ 2.04
RAB40C-201ENST00000248139 VEZTQ9HBM0 779 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 ARHGEF10LQ9HCE6 1279 aa27.78■■■□□ 2.04
RAB40C-201ENST00000248139 HIP1RO75146 1068 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 ENTPD3O75355 529 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 HPDP32754 393 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-201ENST00000248139 AADACL2Q6P093 401 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 FRMD4BQ9Y2L6 1034 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 FOXN3O00409 490 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-201ENST00000248139 EIF3DO15371 548 aaKnown RBP eCLIP27.77■■■□□ 2.04
RAB40C-201ENST00000248139 PPP1R12BO60237 982 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-201ENST00000248139 HSD17B3P37058 310 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 UAP1Q16222 522 aaPredicted RBP27.77■■■□□ 2.04
RAB40C-201ENST00000248139 SLC20A1Q8WUM9 679 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 AGBL1Q96MI9 1066 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 THAP2Q9H0W7 228 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 ISCUQ9H1K1 167 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 TMX2Q9Y320 296 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 BRWD3Q6RI45 1802 aa27.77■■■□□ 2.04
RAB40C-201ENST00000248139 ATRNL1Q5VV63 1379 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 VGLL3A8MV65 326 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 C21orf2O43822 256 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 SLFN11Q7Z7L1 901 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 ELMO3Q96BJ8 720 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 TMEM39BQ9GZU3 492 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 LRRC4CQ9HCJ2 640 aa27.76■■■□□ 2.04
RAB40C-201ENST00000248139 IPO5O00410 1097 aaKnown RBP27.76■■■□□ 2.03
RAB40C-201ENST00000248139 FGGP02679 453 aa27.76■■■□□ 2.03
RAB40C-201ENST00000248139 STK33Q9BYT3 514 aa27.76■■■□□ 2.03
RAB40C-201ENST00000248139 FBXL5Q9UKA1 691 aa27.76■■■□□ 2.03
RAB40C-201ENST00000248139 DGKZQ13574 1117 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 GRIPAP1Q4V328 841 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 DCAF12L1Q5VU92 463 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 WHAMMQ8TF30 809 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 NACC1Q96RE7 527 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 TRIM51Q9BSJ1 452 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 ARHGEF35A5YM69 484 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 CORO7P57737 925 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 IL31RAQ8NI17 732 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 STK24Q9Y6E0 443 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 FRMPD4Q14CM0 1322 aa27.75■■■□□ 2.03
RAB40C-201ENST00000248139 GTPBP10A4D1E9 387 aaKnown RBP27.75■■■□□ 2.03
RAB40C-201ENST00000248139 ITGB5P18084 799 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms