RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TGFB1I1O43294 461 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 GAS2O43903 313 aaKnown RBP15.62■□□□□ 0.09
SDF2-201ENST00000247020 HOXC6P09630 235 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 ATP4AP20648 1035 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 LRMPQ12912 555 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 DMP1Q13316 513 aaPredicted RBP15.62■□□□□ 0.09
SDF2-201ENST00000247020 FAM102BQ5T8I3 360 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 C12orf56Q8IXR9 622 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
SDF2-201ENST00000247020 ACCSQ96QU6 501 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 TINF2Q9BSI4 451 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 TMX1Q9H3N1 280 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 NDST4Q9H3R1 872 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 DHX33Q9H6R0 707 aaKnown RBP15.62■□□□□ 0.09
SDF2-201ENST00000247020 TELO2Q9Y4R8 837 aa15.62■□□□□ 0.09
SDF2-201ENST00000247020 TMEM150BA6NC51 233 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 GH1P01241 217 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 NR3C1P04150 777 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 SKILP12757 684 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 TBC1D8BQ0IIM8 1120 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 MAP2K5Q13163 448 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 TARBP2Q15633 366 aaKnown RBP15.61■□□□□ 0.09
SDF2-201ENST00000247020 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 TRIM59Q8IWR1 403 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 TC2NQ8N9U0 490 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 PANX2Q96RD6 677 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 NAA15Q9BXJ9 866 aaKnown RBP15.61■□□□□ 0.09
SDF2-201ENST00000247020 KCND1Q9NSA2 647 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 CPA4Q9UI42 421 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 EXOC7Q9UPT5 735 aa15.61■□□□□ 0.09
SDF2-201ENST00000247020 TOMM70O94826 608 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 SNAI1O95863 264 aaPredicted RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 ALDH1A1P00352 501 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 EPB41P11171 864 aaKnown RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 ARID5BQ14865 1188 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 EMC2Q15006 297 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 HSDL1Q3SXM5 330 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 MTERF2Q49AM1 385 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 ZC2HC1CQ53FD0 456 aaPredicted RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 HAUS6Q7Z4H7 955 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 SOCS4Q8WXH5 440 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 IFT74Q96LB3 600 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 CEP89Q96ST8 783 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 SMARCAD1Q9H4L7 1026 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 POLD4Q9HCU8 107 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 XPNPEP1Q9NQW7 623 aa15.6■□□□□ 0.09
SDF2-201ENST00000247020 ABT1Q9ULW3 272 aaKnown RBP15.6■□□□□ 0.09
SDF2-201ENST00000247020 DOCK3Q8IZD9 2030 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 PES1O00541 588 aaKnown RBP15.59■□□□□ 0.09
SDF2-201ENST00000247020 STX10O60499 249 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 SORBS3O60504 671 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 GYPCP04921 128 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 PEX3P56589 373 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 ARHGAP1Q07960 439 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 PPP2R5AQ15172 486 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 MAEAQ7L5Y9 396 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 SLC7A3Q8WY07 619 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 USP6NLQ92738 828 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 JPH2Q9BR39 696 aaPredicted RBP15.59■□□□□ 0.09
SDF2-201ENST00000247020 SH2D3AQ9BRG2 576 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 RRAGDQ9NQL2 400 aaPredicted RBP15.59■□□□□ 0.09
SDF2-201ENST00000247020 DMAC2Q9NW81 257 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 ARMCX3Q9UH62 379 aaPredicted RBP15.59■□□□□ 0.09
SDF2-201ENST00000247020 PYCARDQ9ULZ3 195 aa15.59■□□□□ 0.09
SDF2-201ENST00000247020 MAPK13O15264 365 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 CA12O43570 354 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 MFAP3LO75121 409 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 MAFO75444 373 aaPredicted RBP15.58■□□□□ 0.09
SDF2-201ENST00000247020 PSMC2P35998 433 aaKnown RBP15.58■□□□□ 0.09
SDF2-201ENST00000247020 NPTX2P47972 431 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 RBL2Q08999 1139 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 KCNA1Q09470 495 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 DUSP28Q4G0W2 176 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 OLFML2BQ68BL8 750 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 IQSEC1Q6DN90 963 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 MAP4K3Q8IVH8 894 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 SYCP3Q8IZU3 236 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 TMEM161BQ8NDZ6 487 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 PPTC7Q8NI37 304 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 GLG1Q92896 1179 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 EEF2KMTQ96G04 330 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 GPRC5CQ9NQ84 441 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 KMT5AQ9NQR1 393 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 PDGFCQ9NRA1 345 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 AGPAT3Q9NRZ7 376 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 SPTLC3Q9NUV7 552 aa15.58■□□□□ 0.09
SDF2-201ENST00000247020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.58■□□□□ 0.09
SDF2-201ENST00000247020 A0A1W2PQJ5 194 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 ARHGAP6O43182 974 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 HBP1O60381 514 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 FECHP22830 423 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 RGS2P41220 211 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 EDEM3Q9BZQ6 932 aa15.58■□□□□ 0.08
SDF2-201ENST00000247020 TTYH3Q9C0H2 523 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms