RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 ANKRD65E5RJM6 399 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 STAT1P42224 750 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 MAGEA9P43362 315 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 PRELPP51888 382 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 ERVK-9P63128 1117 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 SLFN11Q7Z7L1 901 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 SLC5A5Q92911 643 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 TAF1DQ9H5J8 278 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 RABEP2Q9H5N1 569 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 TMX2Q9Y320 296 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 NOC2LQ9Y3T9 749 aaKnown RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 FRMPD4Q14CM0 1322 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 COL4A5P29400 1685 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 A0A0A6YYK5 440 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 PGRMC1O00264 195 aaKnown RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 GAS7O60861 476 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 CLSTN1O94985 981 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 FMO5P49326 533 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 SKOR1P84550 965 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 NFIL3Q16649 462 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 DAAM2Q86T65 1068 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-202ENST00000244303 OLIG1Q8TAK6 271 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 ISCUQ9H1K1 167 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
HIF3A-202ENST00000244303 F8VZ95 297 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 GCOM1H8Y6P7 765 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 POLR2MP0CAP2 368 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 SOX5P35711 763 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CYP2J2P51589 502 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 GALCP54803 685 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 HLTFQ14527 1009 aaKnown RBP eCLIP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 TTC31Q49AM3 519 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CBWD6Q4V339 395 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CBWD3Q5JTY5 395 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CBWD5Q5RIA9 395 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 ZNF720Q7Z2F6 126 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 FAM178BQ8IXR5 827 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 SLC30A5Q8TAD4 765 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 BCAS4Q8TDM0 211 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 LMBR1Q8WVP7 490 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 VEZTQ9HBM0 779 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 INTUQ9ULD6 942 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 ZBTB21Q9ULJ3 1066 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 ECHS1P30084 290 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CCT5P48643 541 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 DRAP1Q14919 205 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 NT5DC3Q86UY8 548 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 CALR3Q96L12 384 aaKnown RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 MKNK1Q9BUB5 465 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 DDX47Q9H0S4 455 aaKnown RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 GOPCQ9HD26 462 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-202ENST00000244303 DNAJC12Q9UKB3 198 aa15.65■□□□□ 0.1
HIF3A-202ENST00000244303 SART1O43290 800 aaKnown RBP15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ATP1A2P50993 1020 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ZNF131P52739 623 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 HS2ST1Q7LGA3 356 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 DDX42Q86XP3 938 aaKnown RBP eCLIP15.64■□□□□ 0.09
HIF3A-202ENST00000244303 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 CD302Q8IX05 232 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 SYCE1Q8N0S2 351 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 STK33Q9BYT3 514 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 UNC45AQ9H3U1 944 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 OSGEPQ9NPF4 335 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 AGPAT3Q9NRZ7 376 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 SEL1LQ9UBV2 794 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 UBE4BO95155 1302 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 KRIT1O00522 736 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ARP10275 920 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 HSPA9P38646 679 aaKnown RBP15.64■□□□□ 0.09
HIF3A-202ENST00000244303 NPEPPSP55786 919 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 CORO7P57737 925 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 TRAF1Q13077 416 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 PDCLQ13371 301 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
HIF3A-202ENST00000244303 CEP55Q53EZ4 464 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ODR4Q5SWX8 454 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 RASGEF1CQ8N431 466 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 PPM1EQ8WY54 764 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 NACC1Q96RE7 527 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 GPR88Q9GZN0 384 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 TMEM39BQ9GZU3 492 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 ZNRF3Q9ULT6 936 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 FRMD4BQ9Y2L6 1034 aa15.64■□□□□ 0.09
HIF3A-202ENST00000244303 FAM170AA1A519 330 aa15.63■□□□□ 0.09
HIF3A-202ENST00000244303 ITGA4P13612 1032 aa15.63■□□□□ 0.09
HIF3A-202ENST00000244303 CUL1Q13616 776 aa15.63■□□□□ 0.09
HIF3A-202ENST00000244303 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
HIF3A-202ENST00000244303 MIGA2Q7L4E1 593 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms