RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 GPR25O00155 361 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 TGFB1I1O43294 461 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 MMP3P08254 477 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 UBASH3AP57075 661 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 GOLGA8FQ08AF8 430 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 GOLGA8DPQ0D2H9 430 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 STIM1Q13586 685 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 SARM1Q6SZW1 724 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 VPS16Q9H269 839 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 MGAMO43451 1857 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 PLS3P13797 630 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 CNGA1P29973 690 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 CCND3P30281 292 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 NPTX2P47972 431 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 POLGP54098 1239 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 EMC2Q15006 297 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 KRT31Q15323 416 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 COBLL1Q53SF7 1204 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF507Q8TCN5 953 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 PPP1R16BQ96T49 567 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 CCDC94Q9BW85 323 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 POLR3FQ9H1D9 316 aaPredicted RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 DHX33Q9H6R0 707 aaKnown RBP14.24□□□□□ -0.13
HIF3A-201ENST00000244302 OLFML3Q9NRN5 406 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 ODF2LQ9ULJ1 636 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 ZMYM2Q9UBW7 1377 aa14.24□□□□□ -0.13
HIF3A-201ENST00000244302 KCNJ18B7U540 433 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 K7ENM7 598 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 KCNJ12Q14500 433 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 HIC1Q14526 733 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 TCP11X2Q5H9J9 407 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 LRRC55Q6ZSA7 311 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 PLPPR4Q7Z2D5 763 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 TLK2Q86UE8 772 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 ATP8B4Q8TF62 1192 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 ZMYND15Q9H091 742 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 KCND2Q9NZV8 630 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 PYCARDQ9ULZ3 195 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 MYH11P35749 1972 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 DGAT1O75907 488 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 PGK1P00558 417 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 INSRRP14616 1297 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 CASP4P49662 377 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 KNOP1Q1ED39 458 aaKnown RBP14.23□□□□□ -0.13
HIF3A-201ENST00000244302 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-201ENST00000244302 CCDC186Q7Z3E2 898 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
HIF3A-201ENST00000244302 KAT2BQ92831 832 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 SMARCAD1Q9H4L7 1026 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 ATP6V0A4Q9HBG4 840 aa14.23□□□□□ -0.13
HIF3A-201ENST00000244302 EMSYQ7Z589 1322 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 H3BRB1 525 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 PPP1R37O75864 691 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 GAP43P17677 238 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 GLRA2P23416 452 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 TAS1R3Q7RTX0 852 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 HAUS6Q7Z4H7 955 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 FILIP1Q7Z7B0 1213 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 TMEM161BQ8NDZ6 487 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 EMID1Q96A84 441 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-201ENST00000244302 TUT1Q9H6E5 874 aaKnown RBP14.22□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF236Q9UL36 1845 aa14.22□□□□□ -0.13
HIF3A-201ENST00000244302 TTLL13PA6NNM8 815 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 DKC1O60832 514 aaKnown RBP eCLIP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 EDN1P05305 212 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 XRCC5P13010 732 aaKnown RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CYBAP13498 195 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CLCN3P51790 818 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CEP135Q66GS9 1140 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CCDC155Q8N6L0 562 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 BBXQ8WY36 941 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 PCIF1Q9H4Z3 704 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 ERAP1Q9NZ08 941 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 LARSQ9P2J5 1176 aaKnown RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 A6NJR5 290 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 TPM4P67936 248 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF200P98182 395 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 ADAM9Q13443 819 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 NR1I3Q14994 352 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 METTL13Q8N6R0 699 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 PRPF31Q8WWY3 499 aaKnown RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 CNOT6LQ96LI5 555 aaKnown RBP14.21□□□□□ -0.13
HIF3A-201ENST00000244302 SETD4Q9NVD3 440 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 FAM184BQ9ULE4 1060 aa14.21□□□□□ -0.13
HIF3A-201ENST00000244302 ANKRD63C9JTQ0 380 aa14.2□□□□□ -0.14
HIF3A-201ENST00000244302 MAFO75444 373 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-201ENST00000244302 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms