RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 PAGR1Q9BTK6 254 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 DDX47Q9H0S4 455 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 INTUQ9ULD6 942 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 CCDC188H7C350 402 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 CLIC2O15247 247 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 CIITAP33076 1130 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 RBM26Q5T8P6 1007 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 SAMD7Q7Z3H4 446 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 GLTPD2A6NH11 291 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 SPDYE3A6NKU9 549 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 TMCO5BA8MYB1 307 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 KRIT1O00522 736 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 TGFB1I1O43294 461 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 ITGA4P13612 1032 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 FERP16591 822 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 INPP5BP32019 993 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 MMP14P50281 582 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 NPEPPSP55786 919 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 LRRC45Q96CN5 670 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 EYA4O95677 639 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 ZNF844Q08AG5 666 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 USH1GQ495M9 461 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 SPATS2Q86XZ4 545 aaKnown RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 SYCE1Q8N0S2 351 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 GPC2Q8N158 579 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 OR2W6PQ8NHA6 318 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 ZNF473Q8WTR7 871 aaKnown RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 EIF2AK1Q9BQI3 630 aaKnown RBP16.9■□□□□ 0.3
CTSD-201ENST00000236671 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
CTSD-201ENST00000236671 ASTN2O75129 1339 aaPredicted RBP16.89■□□□□ 0.29
CTSD-201ENST00000236671 GOLGA6L10A6NI86 522 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 SRRM3A6NNA2 597 aaPredicted RBP16.89■□□□□ 0.29
CTSD-201ENST00000236671 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
CTSD-201ENST00000236671 EML1O00423 815 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 GFPT2O94808 682 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
CTSD-201ENST00000236671 MYZAPP0CAP1 466 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 CACNB3P54284 484 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
CTSD-201ENST00000236671 ICE2Q659A1 982 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 DAAM2Q86T65 1068 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 MICALL2Q8IY33 904 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 GMLQ99445 158 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 IKZF4Q9H2S9 585 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 SLITRK6Q9H5Y7 841 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 AMACRQ9UHK6 382 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 NCANO14594 1321 aa16.89■□□□□ 0.29
CTSD-201ENST00000236671 DDTLA6NHG4 134 aaPredicted RBP16.88■□□□□ 0.29
CTSD-201ENST00000236671 OPLAHO14841 1288 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 EVI5O60447 810 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 GAP43P17677 238 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 FLT3P36888 993 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 STAT1P42224 750 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 CRKP46108 304 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 GALCP54803 685 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 ICA1Q05084 483 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 TBC1D10BQ4KMP7 808 aaPredicted RBP16.88■□□□□ 0.29
CTSD-201ENST00000236671 RINT1Q6NUQ1 792 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 MYCBPAPQ8TBZ2 947 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 SEC14L1Q92503 715 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 RGL1Q9NZL6 768 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 F5H6K3 240 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 F8VZ95 297 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 EIF3DO15371 548 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTSD-201ENST00000236671 YY1P25490 414 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 HPDP32754 393 aaPredicted RBP16.88■□□□□ 0.29
CTSD-201ENST00000236671 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
CTSD-201ENST00000236671 SEC24CP53992 1094 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 KLRC3Q07444 240 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 CCT8L2Q96SF2 557 aa16.88■□□□□ 0.29
CTSD-201ENST00000236671 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
CTSD-201ENST00000236671 SFI1A8K8P3 1242 aa16.87■□□□□ 0.29
CTSD-201ENST00000236671 MYO1FO00160 1098 aa16.87■□□□□ 0.29
CTSD-201ENST00000236671 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
CTSD-201ENST00000236671 DAPK3O43293 454 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms