RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 KBTBD4Q9NVX7 518 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 COMMD10Q9Y6G5 202 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 MEGF6O75095 1541 aa14.8□□□□□ -0.04
NFKB1-201ENST00000226574 H0YIN7 160 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CHN1P15882 459 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CASP4P49662 377 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 EIF3BP55884 814 aaKnown RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 ITIH3Q06033 890 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CYFIP2Q96F07 1278 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 KLHL11Q9NVR0 708 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 SSU72P8A0A1W2PR75 194 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 TCP11X1B4DZS4 312 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 MAP2K7O14733 419 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 ITGA4P13612 1032 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 HSD17B3P37058 310 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 PIK3CAP42336 1068 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 RASSF2P50749 326 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 TRIM59Q8IWR1 403 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 PARP9Q8IXQ6 854 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 MMGT1Q8N4V1 131 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 DUSP9Q99956 384 aaKnown RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 SAYSD1Q9NPB0 183 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 G3BP2Q9UN86 482 aaKnown RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 EMSYQ7Z589 1322 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 I3L4J1 428 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 STAMBPO95630 424 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 GAP43P17677 238 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 STAT2P52630 851 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 GRB10Q13322 594 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 NAALADL2Q58DX5 795 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 SCARA5Q6ZMJ2 495 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 USP38Q8NB14 1042 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CYTH2Q99418 400 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 KMT5AQ9NQR1 393 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 TYW1Q9NV66 732 aaKnown RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 MTMR4Q9NYA4 1195 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 MAD2L2Q9UI95 211 aa14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CLTCQ00610 1675 aaKnown RBP14.79□□□□□ -0.04
NFKB1-201ENST00000226574 CYP26A1O43174 497 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 NTSR2O95665 410 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 SLC29A2Q14542 456 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 SLMAPQ14BN4 828 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 ARHGEF18Q6ZSZ5 1173 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 ANKRD35Q8N283 1001 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 ELMO3Q96BJ8 720 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 YIPF3Q9GZM5 350 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 SEPT9Q9UHD8 586 aaPredicted RBP14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PDHBP11177 359 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 FGFR2P21802 821 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 GPSM2P81274 684 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PDCD7Q8N8D1 485 aaKnown RBP14.78□□□□□ -0.04
NFKB1-201ENST00000226574 KIAA0895Q8NCT3 520 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 GRK7Q8WTQ7 553 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 SEC16BQ96JE7 1060 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 CPSF2Q9P2I0 782 aaKnown RBP14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PPEF1O14829 653 aaPredicted RBP14.78□□□□□ -0.04
NFKB1-201ENST00000226574 SMIM24O75264 130 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 GPC5P78333 572 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 BRDTQ58F21 947 aaPredicted RBP14.78□□□□□ -0.04
NFKB1-201ENST00000226574 MYCBPAPQ8TBZ2 947 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 MAIP1Q8WWC4 291 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 OSGEPQ9NPF4 335 aa14.78□□□□□ -0.04
NFKB1-201ENST00000226574 H7C0C1 242 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 GOLGA8RI6L899 631 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 MSH2P43246 934 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 ATP5OP48047 213 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 ADCY2Q08462 1091 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 PTGISQ16647 500 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 NT5DC1Q5TFE4 455 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 ACCSQ96QU6 501 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 EIF2AK1Q9BQI3 630 aaKnown RBP14.77□□□□□ -0.04
NFKB1-201ENST00000226574 FERMT1Q9BQL6 677 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 NUP85Q9BW27 656 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 HSD3B7Q9H2F3 369 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 SLURP2P0DP57 97 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 NAB2Q15742 525 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 MTERF2Q49AM1 385 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 SPZ1Q9BXG8 430 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 TLR10Q9BXR5 811 aa14.77□□□□□ -0.04
NFKB1-201ENST00000226574 NOP56O00567 594 aaKnown RBP14.77□□□□□ -0.05
NFKB1-201ENST00000226574 CLDN3O15551 220 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 WDR59Q6PJI9 974 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 PADI6Q6TGC4 694 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 RNF207Q6ZRF8 634 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 RFFLQ8WZ73 363 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 IWS1Q96ST2 819 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.05
NFKB1-201ENST00000226574 NAGPAQ9UK23 515 aa14.77□□□□□ -0.05
NFKB1-201ENST00000226574 FOXP2O15409 715 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms