RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 CENPFP49454 3210 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 A6NJR5 290 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 GCNT3O95395 438 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 PLS3P13797 630 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 POLGP54098 1239 aaPredicted RBP19.9■□□□□ 0.78
CBX1-201ENST00000225603 ZNF720Q7Z2F6 126 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 FAM178BQ8IXR5 827 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 TRAPPC12Q8WVT3 735 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 TIPINQ9BVW5 301 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 SEL1LQ9UBV2 794 aa19.9■□□□□ 0.78
CBX1-201ENST00000225603 PPP1R2P41236 205 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 SLC26A2P50443 739 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 TMEM143Q96AN5 459 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 DRC1Q96MC2 740 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 KCTD10Q9H3F6 313 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 TRPC6Q9Y210 931 aa19.89■□□□□ 0.77
CBX1-201ENST00000225603 DYNC1I1O14576 645 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 SKILP12757 684 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 AKR1A1P14550 325 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 HOXD10P28358 340 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 PEX3P56589 373 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 CCZ1BP86790 482 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 CCZ1P86791 482 aaPredicted RBP19.88■□□□□ 0.77
CBX1-201ENST00000225603 DGKDQ16760 1214 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 MCPH1Q8NEM0 835 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 ZBTB10Q96DT7 871 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 ADCY3O60266 1144 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 BEX3Q00994 111 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 DRP2Q13474 957 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 ZCWPW2Q504Y3 356 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 CDKAL1Q5VV42 579 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 TMC6Q7Z403 805 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 IRF2BP1Q8IU81 584 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 ZNF507Q8TCN5 953 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 ERO1AQ96HE7 468 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 POLR3FQ9H1D9 316 aaPredicted RBP19.88■□□□□ 0.77
CBX1-201ENST00000225603 LARSQ9P2J5 1176 aaKnown RBP19.88■□□□□ 0.77
CBX1-201ENST00000225603 MYH11P35749 1972 aa19.88■□□□□ 0.77
CBX1-201ENST00000225603 H3BRB1 525 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 CNGA1P29973 690 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 HTTP42858 3142 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 BMT2Q1RMZ1 405 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 KIFC3Q9BVG8 833 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 STRA6Q9BX79 667 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 SRRTQ9BXP5 876 aaKnown RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 TUT1Q9H6E5 874 aaKnown RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 CASP8AP2Q9UKL3 1982 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 HBP1O60381 514 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 MAFO75444 373 aaPredicted RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 PRKAR2AP13861 404 aaKnown RBP19.87■□□□□ 0.77
CBX1-201ENST00000225603 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 KIFAP3Q92845 792 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 Q9Y3F1 56 aa19.87■□□□□ 0.77
CBX1-201ENST00000225603 BICDL2A1A5D9 508 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 MYADML2A6NDP7 307 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 PPP1R37O75864 691 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 INSRRP14616 1297 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 RFC5P40937 340 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 NPTX2P47972 431 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 C1QTNF8P60827 252 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 TBC1D8BQ0IIM8 1120 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 MKRN4PQ13434 485 aaPredicted RBP19.86■□□□□ 0.77
CBX1-201ENST00000225603 CSGALNACT2Q8N6G5 542 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 CCDC150Q8NCX0 1101 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 PPP1R13LQ8WUF5 828 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 KAT2BQ92831 832 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 AP5M1Q9H0R1 490 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 K7ENM7 598 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 SLC16A4O15374 487 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 CBFA2T2O43439 604 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 DUSP11O75319 330 aaKnown RBP19.86■□□□□ 0.77
CBX1-201ENST00000225603 KNOP1Q1ED39 458 aaKnown RBP19.86■□□□□ 0.77
CBX1-201ENST00000225603 RAET1EQ8TD07 263 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 ASAP3Q8TDY4 903 aa19.86■□□□□ 0.77
CBX1-201ENST00000225603 EIF3DO15371 548 aaKnown RBP eCLIP19.85■□□□□ 0.772e-7■■■■□ 21
CBX1-201ENST00000225603 SERPINC1P01008 464 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 CDK11BP21127 795 aaKnown RBP19.85■□□□□ 0.77
CBX1-201ENST00000225603 ARL2P36404 184 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 IGBP1P78318 339 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 MAP2K1Q02750 393 aaPredicted RBP19.85■□□□□ 0.77
CBX1-201ENST00000225603 C16orf45Q96MC5 204 aaPredicted RBP19.85■□□□□ 0.77
CBX1-201ENST00000225603 ZNF215Q9UL58 517 aaPredicted RBP19.85■□□□□ 0.77
CBX1-201ENST00000225603 CEP350Q5VT06 3117 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 ZMYM2Q9UBW7 1377 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 ADGRA3Q8IWK6 1321 aa19.85■□□□□ 0.77
CBX1-201ENST00000225603 CCDC169A6NNP5 214 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 SEPT4O43236 478 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 GNRH1P01148 92 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 MAPTP10636 758 aaKnown RBP19.84■□□□□ 0.77
CBX1-201ENST00000225603 GTF2F1P35269 517 aaKnown RBP eCLIP19.84■□□□□ 0.774e-13■■□□□ 13.1
CBX1-201ENST00000225603 UBASH3AP57075 661 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 FSCN1Q16658 493 aaKnown RBP19.84■□□□□ 0.77
CBX1-201ENST00000225603 APTXQ7Z2E3 356 aaKnown RBP19.84■□□□□ 0.77
CBX1-201ENST00000225603 HAUS6Q7Z4H7 955 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 LRRC71Q8N4P6 559 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 SUGCTQ9HAC7 445 aa19.84■□□□□ 0.77
CBX1-201ENST00000225603 IGKV6-21A0A0C4DH24 114 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms