RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.251e-13■■■■■ 64.2
TGFB1-201ENST00000221930 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 HLTFQ14527 1009 aaKnown RBP eCLIP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 CCDC174Q6PII3 467 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 TPCN2Q8NHX9 752 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 METTL14Q9HCE5 456 aaKnown RBP16.64■□□□□ 0.25
TGFB1-201ENST00000221930 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
TGFB1-201ENST00000221930 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 PRKCIP41743 596 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 JAM2P57087 298 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 TNNC1P63316 161 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 PDCLQ13371 301 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 FAM186BQ8IYM0 893 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
TGFB1-201ENST00000221930 DDX47Q9H0S4 455 aaKnown RBP16.63■□□□□ 0.25
TGFB1-201ENST00000221930 ENTPD3O75355 529 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 DAAM2Q86T65 1068 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 PSMD1Q99460 953 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
TGFB1-201ENST00000221930 WRAP73Q9P2S5 460 aaPredicted RBP16.63■□□□□ 0.25
TGFB1-201ENST00000221930 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
TGFB1-201ENST00000221930 BTNL10A8MVZ5 291 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 EVI5O60447 810 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 TRIM49P0CI25 452 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 TRIM49CP0CI26 452 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 CYP2J2P51589 502 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 GLYCTKQ8IVS8 523 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 RDH13Q8NBN7 331 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 CALR3Q96L12 384 aaKnown RBP16.62■□□□□ 0.25
TGFB1-201ENST00000221930 A0A087WUV0 522 aaPredicted RBP16.62■□□□□ 0.25
TGFB1-201ENST00000221930 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.255e-8■■□□□ 12.8
TGFB1-201ENST00000221930 SLC16A3O15427 465 aaKnown RBP16.62■□□□□ 0.25
TGFB1-201ENST00000221930 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 USP8P40818 1118 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 STAT2P52630 851 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 AOC3Q16853 763 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 VPS36Q86VN1 386 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
TGFB1-201ENST00000221930 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 PLS1Q14651 629 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 ITFG2Q969R8 447 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 NOC2LQ9Y3T9 749 aaKnown RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 ZEB2O60315 1214 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 CYP3A4P08684 503 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 ABCB4P21439 1286 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 GALCP54803 685 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 IFI16Q16666 785 aaKnown RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 LNX1Q8TBB1 728 aaPredicted RBP16.61■□□□□ 0.25
TGFB1-201ENST00000221930 SCFD2Q8WU76 684 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 PARVGQ9HBI0 331 aa16.61■□□□□ 0.25
TGFB1-201ENST00000221930 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 KRIT1O00522 736 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 PSMD10O75832 226 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 STAT1P42224 750 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 BTNL9Q6UXG8 535 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 MAEAQ7L5Y9 396 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 MAATS1Q7Z4T9 603 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 PBKQ96KB5 322 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 CENPHQ9H3R5 247 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-201ENST00000221930 AMACRQ9UHK6 382 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 SAMM50Q9Y512 469 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 H0YHG0 523 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
TGFB1-201ENST00000221930 GAS7O60861 476 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 ECHS1P30084 290 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 SARNPP82979 210 aaKnown RBP16.6■□□□□ 0.25
TGFB1-201ENST00000221930 FAM178BQ8IXR5 827 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 FBXL5Q9UKA1 691 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 PLAAQ9Y263 795 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 F8VZ95 297 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 ZBTB48P10074 688 aaPredicted RBP16.6■□□□□ 0.25
TGFB1-201ENST00000221930 GAP43P17677 238 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 FMO5P49326 533 aa16.6■□□□□ 0.25
TGFB1-201ENST00000221930 GUCY1A3Q02108 690 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms