RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SUN1O94901 812 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CELF2O95319 508 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 IFNAR1P17181 557 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CASP14P31944 242 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SESN3P58005 492 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 KCNA1Q09470 495 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CENPUQ71F23 418 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SLC26A7Q8TE54 656 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 RMDN1Q96DB5 314 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 EFCAB6Q5THR3 1501 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 IQANK1A0A1B0GTG1 560 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SLC16A4O15374 487 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CALB1P05937 261 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CCNE1P24864 410 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 QARSP47897 775 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 ARMC6Q6NXE6 501 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 TNIP3Q96KP6 325 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 POLR3FQ9H1D9 316 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 ARHGEF12Q9NZN5 1544 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 ATP1A2P50993 1020 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 NME3Q13232 169 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 TBC1D9BQ66K14 1250 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 RASSF4Q9H2L5 321 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 PIH1D3Q9NQM4 214 aaKnown RBP11.28□□□□□ -0.6
TRPS1-201ENST00000220888 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
TRPS1-201ENST00000220888 UTYO14607 1347 aa11.27□□□□□ -0.6
TRPS1-201ENST00000220888 IPO5O00410 1097 aaKnown RBP11.27□□□□□ -0.6
TRPS1-201ENST00000220888 PRAMEP78395 509 aa11.27□□□□□ -0.6
TRPS1-201ENST00000220888 SNX17Q15036 470 aa11.27□□□□□ -0.6
TRPS1-201ENST00000220888 ITPRIPL1Q6GPH6 555 aa11.27□□□□□ -0.6
TRPS1-201ENST00000220888 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.6
TRPS1-201ENST00000220888 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
TRPS1-201ENST00000220888 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CDC25AP30304 524 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 RWDD2BP57060 319 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 PSMC5P62195 406 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 TMEM270Q6UE05 265 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 TTC13Q8NBP0 860 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 FAM20AQ96MK3 541 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 HSPA4LO95757 839 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CHRNA5P30532 468 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 LRRC63Q05C16 580 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 NR5A1Q13285 461 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 FOPNLQ96NB1 174 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CASS4Q9NQ75 786 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 HEY1Q9Y5J3 304 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 EXOC1LA0A1B0GW35 172 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CFAP69A5D8W1 941 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 EFCAB14O75071 495 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CYP21A2P08686 494 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CETPP11597 493 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 IFNAR2P48551 515 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 FCGRTP55899 365 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CDK17Q00537 523 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 RBM41Q96IZ5 413 aaKnown RBP11.27□□□□□ -0.61
TRPS1-201ENST00000220888 TRIM15Q9C019 465 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
TRPS1-201ENST00000220888 MTMR6Q9Y217 621 aa11.27□□□□□ -0.61
TRPS1-201ENST00000220888 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.61
TRPS1-201ENST00000220888 CCL15-CCL14A0A0B4J2E2 113 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 H3BRJ5 948 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SERPING1P05155 500 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 OAS2P29728 719 aaKnown RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 COG2Q14746 738 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 CCL15Q16663 113 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 RNF180Q86T96 592 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SMYD4Q8IYR2 804 aaPredicted RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PBKQ96KB5 322 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 TSSK1BQ9BXA7 367 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PTPRTO14522 1441 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 PRDX5P30044 214 aa11.26□□□□□ -0.61
TRPS1-201ENST00000220888 RRM2BQ7LG56 351 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms