RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IKQ13123 557 aaPredicted RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 CCDC26Q8TAB7 109 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 PIGOQ8TEQ8 1089 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 HES6Q96HZ4 224 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 PPANQ9NQ55 473 aaKnown RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 CAPN7Q9Y6W3 813 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 MYO1FO00160 1098 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 EYA4O95677 639 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 NMT1P30419 496 aaKnown RBP18.78■□□□□ 0.6
USB1-201ENST00000219281 NPEPPSP55786 919 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 RINT1Q6NUQ1 792 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 SLC30A10Q6XR72 485 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 MICALCLQ6ZW33 695 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 GLYCTKQ8IVS8 523 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 ARFGAP2Q8N6H7 521 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 DPH5Q9H2P9 285 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 SLITRK6Q9H5Y7 841 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 TDRD3Q9H7E2 651 aaKnown RBP18.78■□□□□ 0.6
USB1-201ENST00000219281 AMFRQ9UKV5 643 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 STK24Q9Y6E0 443 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 GREB1LQ9C091 1923 aaPredicted RBP18.78■□□□□ 0.6
USB1-201ENST00000219281 ZNF646O15015 1829 aaPredicted RBP18.78■□□□□ 0.6
USB1-201ENST00000219281 ATP8B3O60423 1300 aa18.78■□□□□ 0.6
USB1-201ENST00000219281 C21orf2O43822 256 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 ZNF76P36508 570 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 ZC2HC1CQ53FD0 456 aaPredicted RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 TATDN1Q6P1N9 297 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 MYCT1Q8N699 235 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 PRMT6Q96LA8 375 aaPredicted RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 PAGR1Q9BTK6 254 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 SIPA1L1O43166 1804 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 GTPBP10A4D1E9 387 aaKnown RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 F5H6K3 240 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 BUB1BO60566 1050 aaPredicted RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 FOSP01100 380 aaPredicted RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 SOX5P35711 763 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 KLRC3Q07444 240 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 SLC30A5Q8TAD4 765 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 OLIG1Q8TAK6 271 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 SLC35G2Q8TBE7 412 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 POLR3CQ9BUI4 534 aaPredicted RBP18.77■□□□□ 0.6
USB1-201ENST00000219281 STK32BQ9NY57 414 aa18.77■□□□□ 0.6
USB1-201ENST00000219281 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 FAM13AO94988 1023 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 FAM107AO95990 144 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 FGGP02679 453 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 ABCB4P21439 1286 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 HNRNPH1P31943 449 aaKnown RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 PSMC2P35998 433 aaKnown RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 ICA1Q05084 483 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 COG2Q14746 738 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 RNF187Q5TA31 235 aaPredicted RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 RUFY4Q6ZNE9 571 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 SUGP1Q8IWZ8 645 aaKnown RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 DNAJC12Q9UKB3 198 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 KIF13BQ9NQT8 1826 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 ZMYM2Q9UBW7 1377 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 F8VZ95 297 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 GAP43P17677 238 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 TMOD1P28289 359 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 BIRC3Q13489 604 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 MTMR3Q13615 1198 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 DRAP1Q14919 205 aaPredicted RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 ODF2Q5BJF6 829 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 TMC3Q7Z5M5 1100 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 OLFML3Q9NRN5 406 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 UTP11Q9Y3A2 253 aaKnown RBP18.76■□□□□ 0.59
USB1-201ENST00000219281 NR2E1Q9Y466 385 aa18.76■□□□□ 0.59
USB1-201ENST00000219281 GDF11O95390 407 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 CIITAP33076 1130 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 FNTAP49354 379 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 JAG1P78504 1218 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 DHX9Q08211 1270 aaKnown RBP18.75■□□□□ 0.59
USB1-201ENST00000219281 TPH2Q8IWU9 490 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 TRIM51Q9BSJ1 452 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 STK33Q9BYT3 514 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 TRIM31Q9BZY9 425 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 SLC12A6Q9UHW9 1150 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 NOVA2Q9UNW9 492 aaKnown RBP18.75■□□□□ 0.59
USB1-201ENST00000219281 IGSF9BQ9UPX0 1349 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 ZBTB39O15060 712 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 PPIP5K2O43314 1243 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 PPP1R12BO60237 982 aaPredicted RBP18.75■□□□□ 0.59
USB1-201ENST00000219281 LMNB1P20700 586 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 FMO5P49326 533 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 IFT88Q13099 833 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 PRPF4BQ13523 1007 aaKnown RBP18.75■□□□□ 0.59
USB1-201ENST00000219281 SYDE2Q5VT97 1194 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 CNPY4Q8N129 248 aa18.75■□□□□ 0.59
USB1-201ENST00000219281 CNOT8Q9UFF9 292 aaKnown RBP18.75■□□□□ 0.59
USB1-201ENST00000219281 RGPD3A6NKT7 1758 aaPredicted RBP18.74■□□□□ 0.59
USB1-201ENST00000219281 RGPD4Q7Z3J3 1758 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms