RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 KCNB1Q14721 858 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 PRR5LQ6MZQ0 368 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 NUDCD1Q96RS6 583 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 KDM6AO15550 1401 aaPredicted RBP24.85■■□□□ 1.57
TARBP1-201ENST00000040877 VAMP7P51809 220 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 JADE1Q6IE81 842 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 SWSAP1Q6NVH7 229 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 LDHDQ86WU2 507 aa24.85■■□□□ 1.57
TARBP1-201ENST00000040877 TKFCQ3LXA3 575 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 MMEL1Q495T6 779 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 EDEM3Q9BZQ6 932 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 MTMR4Q9NYA4 1195 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 NYAP2Q9P242 653 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 SATB1Q01826 763 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 NGRNQ9NPE2 291 aaKnown RBP24.84■■□□□ 1.57
TARBP1-201ENST00000040877 GCLMP48507 274 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 CEP55Q53EZ4 464 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 KCTD16Q68DU8 428 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 KRT39Q6A163 491 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 TWF2Q6IBS0 349 aaKnown RBP24.84■■□□□ 1.57
TARBP1-201ENST00000040877 Q9H521 79 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
TARBP1-201ENST00000040877 FAM213AQ9BRX8 229 aa24.84■■□□□ 1.57
TARBP1-201ENST00000040877 TTI1O43156 1089 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 DHX38Q92620 1227 aaKnown RBP24.83■■□□□ 1.57
TARBP1-201ENST00000040877 GOLPH3LQ9H4A5 285 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 HMGB1P1B2RPK0 211 aaPredicted RBP24.83■■□□□ 1.57
TARBP1-201ENST00000040877 RASGRF2O14827 1237 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 ZRANB2O95218 330 aaKnown RBP eCLIP24.83■■□□□ 1.57
TARBP1-201ENST00000040877 EYA4O95677 639 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 EFNA5P52803 228 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 COG7P83436 770 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 SMYD2Q9NRG4 433 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 PTPRMP28827 1452 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 POTEFA5A3E0 1075 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 POTEIP0CG38 1075 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 TSPY1Q01534 308 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 SEPT6Q14141 434 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 POTEGQ6S5H5 508 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 POTEEQ6S8J3 1075 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 NDUFAF2Q8N183 169 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 EIF2AK1Q9BQI3 630 aaKnown RBP24.83■■□□□ 1.57
TARBP1-201ENST00000040877 KIF9Q9HAQ2 790 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 ANAPC7Q9UJX3 599 aa24.83■■□□□ 1.57
TARBP1-201ENST00000040877 EXOC1LA0A1B0GW35 172 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 ZNF18P17022 549 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 IQCB1Q15051 598 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 TMED2Q15363 201 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 TRIM72Q6ZMU5 477 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 OTUD5Q96G74 571 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 KLC2Q9H0B6 622 aa24.83■■□□□ 1.56
TARBP1-201ENST00000040877 TRIM49BA6NDI0 452 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 C19orf81C9J6K1 198 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 MORC4Q8TE76 937 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 GCOM2Q9BZD3 368 aaPredicted RBP24.82■■□□□ 1.56
TARBP1-201ENST00000040877 CFAP61Q8NHU2 1237 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 ATP6V1E2Q96A05 226 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 HVCN1Q96D96 273 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 RPAP3Q9H6T3 665 aaPredicted RBP24.82■■□□□ 1.56
TARBP1-201ENST00000040877 FRMPD1Q5SYB0 1578 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 FGGP02679 453 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 ZNF543Q08ER8 600 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 CCSER1Q9C0I3 900 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 TDP2O95551 362 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 EPHB1P54762 984 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 MFSD14CQ5VZR4 134 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 PCGF5Q86SE9 256 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 POLR3FQ9H1D9 316 aaPredicted RBP24.82■■□□□ 1.56
TARBP1-201ENST00000040877 REREQ9P2R6 1566 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 FLT1P17948 1338 aa24.82■■□□□ 1.56
TARBP1-201ENST00000040877 A0A1W2PQC6 194 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 IQANK1A0A1B0GTG1 560 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 LRRC53A6NM62 1247 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 ADCY2Q08462 1091 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 BBS9Q3SYG4 887 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 SRRM1Q8IYB3 904 aaKnown RBP24.81■■□□□ 1.56
TARBP1-201ENST00000040877 TBX3O15119 743 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 MYBL1P10243 752 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 IFNAR2P48551 515 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 C6orf118Q5T5N4 469 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 ZMYND12Q9H0C1 365 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 SLC9A2Q9UBY0 812 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 CNTNAP4Q9C0A0 1308 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 COG2Q14746 738 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 MUM1Q2TAK8 710 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 CLEC17AQ6ZS10 378 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 PYROXD1Q8WU10 500 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 SDCCAG3Q96C92 435 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 TUBB6Q9BUF5 446 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 PARD6BQ9BYG5 372 aa24.81■■□□□ 1.56
TARBP1-201ENST00000040877 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
TARBP1-201ENST00000040877 AGLP35573 1532 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 PDS5AQ29RF7 1337 aaKnown RBP24.8■■□□□ 1.56
TARBP1-201ENST00000040877 LIG3P49916 1009 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 TMEM270Q6UE05 265 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 SPATA33Q96N06 139 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 HINFPQ9BQA5 517 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 SRBD1Q8N5C6 995 aaKnown RBP24.8■■□□□ 1.56
TARBP1-201ENST00000040877 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
TARBP1-201ENST00000040877 CAV1Q03135 178 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms