RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 SucoQ8C341 1250 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 OplahQ8K010 1288 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PdxkQ8K183 312 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 HyiQ8R1F5 277 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ppp1r3gQ9CW07 347 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PpihQ9D868 188 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fmnl1Q9JL26 1094 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hebp1Q9R257 190 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Lama4P97927 1816 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Flvcr1B2RXV4 560 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Speer2E9Q9U2 264 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pagr1bF6V0H0 108 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Nr1i3O35627 358 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 OatP29758 439 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Irx1P81068 480 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gja5Q01231 358 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rhox12Q4TU81 186 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ints9Q8K114 658 aaKnown RBP10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Dusp19Q8K4T5 220 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Bag2Q91YN9 210 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pagr1aQ99L02 253 aa10.5□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cfap70D3YVL2 1141 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc152E9PX14 254 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cdc25aP48964 514 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pstpip1P97814 415 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fam198bQ3UPI1 517 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rsad1Q5SUV1 442 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Klra5Q60652 266 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rasa3Q60790 834 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Retreg2Q6NS82 541 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ints2Q80UK8 1198 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cyp26b1Q811W2 512 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 SpidrQ8BGX7 933 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Epc2Q8C0I4 808 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ttc16Q8C1F5 767 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 AagabQ8R2R3 316 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Vwa5aQ99KC8 793 aaKnown RBP10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hdac9Q99N13 588 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 AllcQ9JHX6 414 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gm5114W4VSN8 858 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cep85lA0A1W2P884 806 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Olfr247E9PVJ7 320 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 4930523C07RikE9Q2T4 99 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Olfr819K7N727 320 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Serpina1bP22599 413 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Klhdc9Q3USL1 350 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Taok1Q5F2E8 1001 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 IgflQ6B9Z0 140 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc50Q810U5 305 aaKnown RBP10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Aldh5a1Q8BWF0 523 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tmx4Q8C0L0 335 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Oxnad1Q8VE38 311 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cd248Q91V98 765 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ubxn6Q99PL6 442 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cmtm5Q9D6G9 156 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc182Q9D9C6 152 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Entpd5Q9WUZ9 427 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Stat2Q9WVL2 923 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 GabreA2AMW3 916 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 AoahO35298 574 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rad51bO35719 350 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Got1P05201 413 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 SarsP26638 512 aaKnown RBP10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Muc3aQ3U5A2 218 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Snx14Q8BHY8 964 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Scfd1Q8BRF7 639 aaKnown RBP10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc15Q8C9M2 810 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Bcas3Q8CCN5 928 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ces4aQ8R0W5 563 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gle1Q8R322 699 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 CsadQ9DBE0 493 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Inpp4aQ9EPW0 939 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cyth1Q9QX11 398 aa10.49□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ccdc88cQ6VGS5 2009 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Arap2Q8BZ05 1703 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ttll10A4Q9F3 704 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Krt36B1AQ75 473 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Arhgap4B1AUY3 965 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gpr161B2RPY5 545 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Serpinb8O08800 374 aaKnown RBP10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cyp11b2P15539 500 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mnat1P51949 309 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rasa2P58069 847 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Sfi1Q3UZY0 1216 aaKnown RBP10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tom1l2Q5SRX1 507 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Baiap3Q80TT2 1134 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Zfp446Q8C9M8 523 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 ClasrpQ8CFC7 668 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Bhmt2Q91WS4 363 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Orc4O88708 433 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tspyl1O88852 379 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 LdhbP16125 334 aaKnown RBP10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Acsbg2Q2XU92 667 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ssxb10Q6XAR7 170 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Defb15Q8R2I5 79 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Usp33Q8R5K2 909 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mxra7Q9CZH7 178 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Grtp1Q9D3N8 359 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 1700109H08RikQ9D9C0 210 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rtn3Q9ES97 964 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms