RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Scfd2Q8BTY8 684 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Krt79Q8VED5 531 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Rfc4Q99J62 364 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 ArcQ9WV31 396 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Slc12a7Q9WVL3 1083 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Bcorl1A2AQH4 1781 aa7.78□□□□□ -1.16
Clrn1-202ENSMUST00000055636 NynrinQ5DTZ0 1840 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Scn3aA2ASI5 1947 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Gm382B1AXN3 1250 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Gm5814J3QP80 125 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 TyrobpO54885 114 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ncf2O70145 525 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 ArP19091 899 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Epb41l4aP52963 686 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Sox10Q04888 466 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Lrrfip1Q3UZ39 729 aaKnown RBP7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ttf2Q5NC05 1138 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Lilrb4Q64281 335 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Slc9c1Q6UJY2 1175 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 E330017A01RikQ8BU47 192 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Plcg2Q8CIH5 1265 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 HlcsQ920N2 722 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Arfgap2Q99K28 520 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Rnf34Q99KR6 376 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Mrfap1Q9CQL7 125 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Usp14Q9JMA1 493 aaKnown RBP7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tjp3Q9QXY1 905 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 EmcnQ9R0H2 261 aa7.77□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tex13c2A0A0G2JGA3 530 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Fyb2A2A995 729 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gm4985A2ALC6 410 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Trappc11B2RXC1 1133 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Oog1E9Q5G7 496 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 R3hdm1E9Q9Q2 1135 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Rfpl4bJ3QPR6 266 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Eftud2O08810 971 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 CfhP06909 1234 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 CatspereP0DP43 985 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Ercc5P35689 1170 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 MagohP61327 146 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gspt2Q149F3 632 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Trpc6Q61143 930 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Anks6Q6GQX6 883 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Foxo6Q70KY4 559 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Celf4Q7TSY6 486 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Cep104Q80V31 926 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Haus1Q8BHX1 278 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Appl2Q8K3G9 662 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Dusp19Q8K4T5 220 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Klhl20Q8VCK5 604 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gpsm2Q8VDU0 679 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Snapc2Q91XA5 359 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 MagohbQ9CQL1 146 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Pramef12Q9D2F1 463 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Lrp2bpQ9D4C6 346 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Rabl3Q9D4V7 236 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Vav3Q9R0C8 847 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gys1Q9Z1E4 738 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Eif2ak1Q9Z2R9 619 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gm28036V9GXJ1 658 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Oip5A2AQ14 241 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Fam171a1A2ATK9 892 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Pcdha4O88689 947 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Fgd3O88842 733 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Zfy1P10925 782 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Scp2P32020 547 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Psmc2P46471 433 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Lrrn4P59383 733 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Shox2P70390 331 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Pstpip1P97814 415 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Trmt1Q3TX08 663 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Tmprss11eQ5S248 423 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Gas8Q60779 478 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 E2f5Q61502 335 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Lrrcc1Q69ZB0 1026 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Zdhhc24Q6IR37 284 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Ppp2r2aQ6P1F6 447 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Herc4Q6PAV2 1057 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Actn1Q7TPR4 892 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Rps6ka6Q7TPS0 764 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 R3hdm2Q80TM6 1044 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Rassf6Q80UQ2 353 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Atg4cQ811C2 458 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Snip1Q8BIZ6 383 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Bbs7Q8K2G4 715 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Enox2Q8R0Z2 598 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 TxlnbQ8VBT1 685 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Nr3c2Q8VII8 978 aa7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 RnmtQ9D0L8 465 aaKnown RBP7.77□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Polr2aP08775 1970 aaKnown RBP7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Osbpl9A2A8Z1 736 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Ildr2B5TVM2 661 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Mroh8E9PYI4 1049 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Chmp6P0C0A3 200 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Fgl2P12804 432 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Fam207aP58468 219 aaKnown RBP7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 YdjcQ14BV6 310 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Cracr2aQ3UP38 310 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 Dph1Q5NCQ5 438 aa7.76□□□□□ -1.17
Clrn1-202ENSMUST00000055636 GartQ64737 1010 aa7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms