RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 WdpcpQ8C456 722 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gramd4Q8CB44 633 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Yipf1Q91VU1 306 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 St5Q924W7 1134 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Grtp1Q9D3N8 359 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fam187aQ9D3R5 417 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 BcamQ9R069 622 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm45261A0A1B0GSP6 197 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Klhdc7aA2APT9 773 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ace3D0G895 737 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 AoahO35298 574 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pon1P52430 355 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ints2Q80UK8 1198 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Q8BGD0 127 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 HhatQ8BMT9 499 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Aldh5a1Q8BWF0 523 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tbc1d10cQ8C9V1 444 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ranbp17Q99NF8 1088 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Hebp1Q9R257 190 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tbc1d16A2ABG4 766 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm6588E9Q3K0 461 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Msh2P43247 935 aaKnown RBP16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Wfs1P56695 890 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tex35Q14BK3 207 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 BC051142Q3V0M8 400 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Igf2bp2Q5SF07 592 aaKnown RBP16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Brip1Q5SXJ3 1174 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 E2f7Q6S7F2 904 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Q8BGC1 442 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pkn3Q8K045 878 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Lrit1Q8K099 624 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ccdc65Q8VHI7 493 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 SfpqQ8VIJ6 699 aaKnown RBP16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Scgb2b20Q9JI02 112 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Col1a1P11087 1453 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm4907B1AXB9 411 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm382B1AXN3 1250 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Slc35g2D3YVE8 412 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cacna2d1O08532 1103 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Eftud2O08810 971 aaKnown RBP16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Traf5P70191 558 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Xxylt1Q3U4G3 392 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ppp2r5eQ61151 467 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ccdc25Q78PG9 208 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tmc4Q7TQ65 694 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gcfc2Q8BKT3 769 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ccdc113Q8C5T8 377 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Vps52Q8C754 723 aaKnown RBP16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Dcaf8Q8N7N5 591 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Grhl1Q921D9 618 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Snx24Q9CRB0 169 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Phf2Q9WTU0 1096 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Myh14Q6URW6 2000 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ttc6G3UYY4 1857 aa16.22■□□□□ 0.19
Nup54-201ENSMUST00000038514 FosP01101 380 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Q32P12 615 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Kctd19Q562E2 927 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Grik5Q61626 979 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fbxo11Q7TPD1 930 aaKnown RBP16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 NrcamQ810U4 1256 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 PolrmtQ8BKF1 1207 aaKnown RBP16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Rccd1Q8BTU7 377 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 OtoaQ8K561 1137 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Klhl36Q8R124 613 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Coa7Q921H9 231 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cabp5Q9JLK3 173 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Osbpl7A2A716 963 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Xrcc6P23475 608 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Nell2Q61220 819 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Hoxa13Q62424 386 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Inpp4bQ6P1Y8 924 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 TwistnbQ78WZ7 330 aaKnown RBP16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Llgl1Q80Y17 1036 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 CrygnQ8VHL5 183 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pabpc6Q9D4E6 643 aaKnown RBP16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Azi2Q9QYP6 405 aa16.21■□□□□ 0.19
Nup54-201ENSMUST00000038514 Col2a1P28481 1487 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Usp17lbE9Q9U0 468 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Zc3h7bF8VPP8 982 aaKnown RBP16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Cep126Q0VBV7 1103 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Dph1Q5NCQ5 438 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Map3k12Q60700 888 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ms4a5Q810P8 197 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Fbxo38Q8BMI0 1194 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Sgsm1Q8BPQ7 1093 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 CactinQ9CS00 772 aaKnown RBP16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Net1Q9Z206 595 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Kmt2eQ3UG20 1868 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 GcP21614 476 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 OatP29758 439 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Mybl2P48972 704 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Syne3Q4FZC9 975 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Dnajc8Q6NZB0 253 aaKnown RBP16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Nucks1Q80XU3 234 aaKnown RBP16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 P2ry10Q8BFU7 328 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Drg2Q9QXB9 364 aaKnown RBP16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ifi202Q9R002 445 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Lypla2Q9WTL7 231 aa16.2■□□□□ 0.18
Nup54-201ENSMUST00000038514 Mms22lB1AUR6 1238 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Il13ra2O88786 383 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms