RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	UTP9	P38882	575 aa	Known RBP	0.48	□□□□□ -2.33
snR49	snR49	ASG7	P46993	209 aa		0.48	□□□□□ -2.33
snR49	snR49	PRP42	Q03776	544 aa	Known RBP	0.48	□□□□□ -2.33
snR49	snR49	YMR130W	Q04223	302 aa		0.48	□□□□□ -2.33
snR49	snR49	YDL109C	Q12103	647 aa		0.48	□□□□□ -2.33
snR49	snR49	RSA4	P25382	515 aa	Known RBP	0.47	□□□□□ -2.33
snR49	snR49	PMT2	P31382	759 aa		0.47	□□□□□ -2.33
snR49	snR49	TOA2	P32774	122 aa		0.47	□□□□□ -2.33
snR49	snR49	YER084W	P40057	128 aa		0.47	□□□□□ -2.33
snR49	snR49	ATM1	P40416	690 aa		0.47	□□□□□ -2.33
snR49	snR49	YCH1	P42937	148 aa		0.47	□□□□□ -2.33
snR49	snR49	BUD13	P46947	266 aa	Predicted RBP	0.47	□□□□□ -2.33
snR49	snR49	AIM23	P47015	356 aa		0.47	□□□□□ -2.33
snR49	snR49	GAS2	Q06135	555 aa		0.47	□□□□□ -2.33
snR49	snR49	PEX30	Q06169	523 aa		0.47	□□□□□ -2.33
snR49	snR49	DXO1	Q06349	442 aa		0.47	□□□□□ -2.33
snR49	snR49	YDR018C	Q12185	396 aa		0.47	□□□□□ -2.33
snR49	snR49	RUP1	Q12242	671 aa		0.47	□□□□□ -2.33
snR49	snR49	TPK3	P05986	398 aa		0.46	□□□□□ -2.34
snR49	snR49	CDC21	P06785	304 aa		0.46	□□□□□ -2.34
snR49	snR49	RPL23A	P0CX41	137 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	RPL23B	P0CX42	137 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	MIR1	P23641	311 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	RPL16A	P26784	199 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	RPB9	P27999	122 aa		0.46	□□□□□ -2.34
snR49	snR49	ASC1	P38011	319 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	INM1	P38710	295 aa		0.46	□□□□□ -2.34
snR49	snR49	STN1	P38960	494 aa		0.46	□□□□□ -2.34
snR49	snR49	CWC22	P53333	577 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	ACL4	Q03771	387 aa		0.46	□□□□□ -2.34
snR49	snR49	UTP15	Q04305	513 aa	Known RBP	0.46	□□□□□ -2.34
snR49	snR49	YDR114C	Q04597	100 aa		0.46	□□□□□ -2.34
snR49	snR49	ECM19	Q06011	112 aa		0.46	□□□□□ -2.34
snR49	snR49	ARR1	Q06596	294 aa		0.46	□□□□□ -2.34
snR49	snR49	OPI3	P05375	206 aa		0.45	□□□□□ -2.34
snR49	snR49	RPS14A	P06367	137 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	BGL2	P15703	313 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	CKA1	P15790	372 aa		0.45	□□□□□ -2.34
snR49	snR49	DPB3	P27344	201 aa		0.45	□□□□□ -2.34
snR49	snR49	ERG3	P32353	365 aa		0.45	□□□□□ -2.34
snR49	snR49	SSE1	P32589	693 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	RPS14B	P39516	138 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	SEC27	P41811	889 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	DON1	Q05610	365 aa		0.45	□□□□□ -2.34
snR49	snR49	MMT2	Q08970	484 aa		0.45	□□□□□ -2.34
snR49	snR49	YPL264C	Q08980	353 aa		0.45	□□□□□ -2.34
snR49	snR49	YOR283W	Q12040	230 aa	Known RBP	0.45	□□□□□ -2.34
snR49	snR49	RNH203	Q12338	110 aa		0.45	□□□□□ -2.34
snR49	snR49	ISN1	Q99312	450 aa		0.45	□□□□□ -2.34
snR49	snR49	CTA1	P15202	515 aa		0.44	□□□□□ -2.34
snR49	snR49	CLB3	P24870	427 aa		0.44	□□□□□ -2.34
snR49	snR49	IMP2'	P32351	346 aa		0.44	□□□□□ -2.34
snR49	snR49	YEL043W	P32618	956 aa		0.44	□□□□□ -2.34
snR49	snR49	TOM22	P49334	152 aa		0.44	□□□□□ -2.34
snR49	snR49	PMT5	P52867	743 aa		0.44	□□□□□ -2.34
snR49	snR49	RPT4	P53549	437 aa	Known RBP	0.44	□□□□□ -2.34
snR49	snR49	MYO5	Q04439	1219 aa	Known RBP	0.44	□□□□□ -2.34
snR49	snR49	FEX1	Q08913	375 aa		0.44	□□□□□ -2.34
snR49	snR49	FEX2	Q08991	375 aa		0.44	□□□□□ -2.34
snR49	snR49	SGT2	Q12118	346 aa	Known RBP	0.44	□□□□□ -2.34
snR49	snR49	MTR10	Q99189	972 aa		0.44	□□□□□ -2.34
snR49	snR49	RPL12A	P0CX53	165 aa	Known RBP	0.43	□□□□□ -2.34
snR49	snR49	RPL12B	P0CX54	165 aa		0.43	□□□□□ -2.34
snR49	snR49	PRP3	Q03338	469 aa	Predicted RBP	0.43	□□□□□ -2.34
snR49	snR49	SCS7	Q03529	384 aa		0.43	□□□□□ -2.34
snR49	snR49	CSI1	Q04368	295 aa		0.43	□□□□□ -2.34
snR49	snR49	MMR1	Q06324	491 aa		0.43	□□□□□ -2.34
snR49	snR49	DIB1	Q06819	143 aa	Predicted RBP	0.43	□□□□□ -2.34
snR49	snR49	GAT3	Q07928	141 aa		0.43	□□□□□ -2.34
snR49	snR49	ARF1	P11076	181 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	SLM5	P25345	492 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	GFD2	P25370	566 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	HSP104	P31539	908 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	ARO4	P32449	370 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	DOA1	P36037	715 aa		0.42	□□□□□ -2.34
snR49	snR49	OLA1	P38219	394 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	TAE1	P38340	232 aa		0.42	□□□□□ -2.34
snR49	snR49	YER188W	P40103	239 aa		0.42	□□□□□ -2.34
snR49	snR49	YFR045W	P43617	309 aa		0.42	□□□□□ -2.34
snR49	snR49	EFM3	P47163	339 aa		0.42	□□□□□ -2.34
snR49	snR49	YNL095C	P53932	642 aa		0.42	□□□□□ -2.34
snR49	snR49	YMR244W	Q04018	355 aa		0.42	□□□□□ -2.34
snR49	snR49	DFM1	Q12743	341 aa	Known RBP	0.42	□□□□□ -2.34
snR49	snR49	INO2	P26798	304 aa		0.41	□□□□□ -2.34
snR49	snR49	MED8	P38304	223 aa		0.41	□□□□□ -2.34
snR49	snR49	RCK1	P38622	512 aa		0.41	□□□□□ -2.34
snR49	snR49	RRG9	P40156	214 aa		0.41	□□□□□ -2.34
snR49	snR49	IRC6	P43615	237 aa		0.41	□□□□□ -2.34
snR49	snR49	CGI121	Q03705	181 aa	Known RBP	0.41	□□□□□ -2.34
snR49	snR49	MED2	Q12124	431 aa		0.41	□□□□□ -2.34
snR49	snR49	TFC7	Q12415	435 aa		0.41	□□□□□ -2.34
snR49	snR49	ZRT3	P34240	503 aa		0.4	□□□□□ -2.35
snR49	snR49	NRG2	P38082	220 aa		0.4	□□□□□ -2.35
snR49	snR49	POP2	P39008	433 aa		0.4	□□□□□ -2.35
snR49	snR49	ECO1	P43605	281 aa		0.4	□□□□□ -2.35
snR49	snR49	INP1	Q03694	420 aa		0.4	□□□□□ -2.35
snR49	snR49	TFS1	P14306	219 aa		0.39	□□□□□ -2.35
snR49	snR49	EFM1	P38732	585 aa		0.39	□□□□□ -2.35
snR49	snR49	YFR054C	P43622	192 aa		0.39	□□□□□ -2.35
snR49	snR49	CAX4	P53223	239 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms