RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SH2B1Q9NRF2 756 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 SPEGQ15772 3267 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 CDKL5O76039 1030 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 CSPG5O95196 566 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 CFBP00751 764 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 HOXA13P31271 388 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 FOSBP53539 338 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 ERVFC1P60507 584 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 SSRP1Q08945 709 aaKnown RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 BTG3Q14201 252 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 KCNV1Q6PIU1 500 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 MCF2L2Q86YR7 1114 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 ATOH1Q92858 354 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 ZBTB10Q96DT7 871 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 GJB4Q9NTQ9 266 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 BARHL2Q9NY43 387 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 MAP3K20Q9NYL2 800 aaKnown RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 MRPL11Q9Y3B7 192 aaKnown RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 TDRD15B5MCY1 1934 aaKnown RBP8.44□□□□□ -1.06
PHGDH-225ENST00000641720 CEP295Q9C0D2 2601 aa8.44□□□□□ -1.06
PHGDH-225ENST00000641720 ZFYVE26Q68DK2 2539 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 SPATA31C2B4DYI2 1134 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 MGEA5O60502 916 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 DEXIO95424 95 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 MCM2P49736 904 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 NAPAP54920 295 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 UBE2SQ16763 222 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 CPLX2Q6PUV4 134 aaKnown RBP8.43□□□□□ -1.06
PHGDH-225ENST00000641720 USP17L6PQ6QN14 398 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 TSHZ1Q6ZSZ6 1077 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 FRMD5Q7Z6J6 570 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 SNX21Q969T3 373 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 RPGRIP1Q96KN7 1286 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 PCYT2Q99447 389 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 CWH43Q9H720 699 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 ORC3Q9UBD5 711 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-225ENST00000641720 CDY2AQ9Y6F7 541 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 LAMA1P25391 3075 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 COL4A2P08572 1712 aa8.43□□□□□ -1.06
PHGDH-225ENST00000641720 ATRXP46100 2492 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 GSTTP1A0A1W2PQM5 241 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 C2CD4DB7Z1M9 353 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 hCG_1984214I3L0E3 225 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 K7ELQ4 463 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 MEIS2O14770 477 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 PER2O15055 1255 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ATP9AO75110 1047 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 MYCLP12524 364 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 KCNA2P16389 499 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 NPR3P17342 541 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 CD52P31358 61 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ADCY7P51828 1080 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ARHGAP4P98171 946 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 AKAP17AQ02040 695 aaKnown RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 CUL4AQ13619 759 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 NPY5RQ15761 445 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 CYFIP1Q7L576 1253 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 RBM23Q86U06 439 aaKnown RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ZNF713Q8N859 430 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 LLPHQ9BRT6 129 aaKnown RBP8.42□□□□□ -1.06
PHGDH-225ENST00000641720 IRF2BPLQ9H1B7 796 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 TMEM260Q9NX78 707 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 SQORQ9Y6N5 450 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 NRCAMQ92823 1304 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 IGSF9BQ9UPX0 1349 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 KDM3AQ9Y4C1 1321 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 ARID2Q68CP9 1835 aa8.42□□□□□ -1.06
PHGDH-225ENST00000641720 SPAG17Q6Q759 2223 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 HIDE1A8MVS5 230 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 GCOM1H8Y6P7 765 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-225ENST00000641720 PIK3CDO00329 1044 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 POLR2MP0CAP2 368 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 CCND2P30279 289 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 ID4P47928 161 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 MRPS6P82932 125 aaKnown RBP8.41□□□□□ -1.06
PHGDH-225ENST00000641720 UBE3AQ05086 875 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 TRAF1Q13077 416 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 PAN2Q504Q3 1202 aaKnown RBP8.41□□□□□ -1.06
PHGDH-225ENST00000641720 TAF2Q6P1X5 1199 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 HSCBQ8IWL3 235 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 KREMEN2Q8NCW0 462 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 DNAJB3Q8WWF6 145 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 CUL5Q93034 780 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 RMDN1Q96DB5 314 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 PGBD1Q96JS3 809 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 SENP7Q9BQF6 1050 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms