RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	NEUROG2	Q9H2A3	272 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	PLCB1	Q9NQ66	1216 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	NR2E1	Q9Y466	385 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	JAM2	P57087	298 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	GBP6	Q6ZN66	633 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	IFT20	Q8IY31	132 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	ZSWIM2	Q8NEG5	633 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	FIZ1	Q96SL8	496 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	TAS2R14	Q9NYV8	317 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	GRIN2D	O15399	1336 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	EVI5	O60447	810 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	CCT5	P48643	541 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	MMP14	P50281	582 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	GNGT1	P63211	74 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	FAM186B	Q8IYM0	893 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	TPCN2	Q8NHX9	752 aa		18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.37	■□□□□ 0.53	2e-7	■■■■□ 19.6
PHGDH-223	ENST00000641597	LUC7L	Q9NQ29	371 aa	Known RBP	18.37	■□□□□ 0.53
PHGDH-223	ENST00000641597	TMEM150B	A6NC51	233 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	HSF2BP	O75031	334 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	PSMD10	O75832	226 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	IVL	P07476	585 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	FLT3	P36888	993 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	STAT2	P52630	851 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	DGKZ	Q13574	1117 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	CAVIN3	Q969G5	261 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	AKT1S1	Q96B36	256 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	TSKS	Q9UJT2	592 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	FOS	P01100	380 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ZBTB48	P10074	688 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ARHGAP44	Q17R89	818 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ARHGAP27	Q6ZUM4	889 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	IQCK	Q8N0W5	287 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ELMO3	Q96BJ8	720 aa		18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	CELF4	Q9BZC1	486 aa	Known RBP	18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-223	ENST00000641597	ECHS1	P30084	290 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	GALC	P54803	685 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	DLG4	P78352	724 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	NNT	Q13423	1086 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	BMT2	Q1RMZ1	405 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	TAF4B	Q92750	862 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	RUFY1	Q96T51	708 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	CAPS2	Q9BXY5	557 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	UNC45A	Q9H3U1	944 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	LRRC4C	Q9HCJ2	640 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	AMACR	Q9UHK6	382 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	SERPINA10	Q9UK55	444 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	SAMM50	Q9Y512	469 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	SHOX2	O60902	331 aa	Predicted RBP	18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	APBA3	O96018	575 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	DAAM2	Q86T65	1068 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	PCIF1	Q9H4Z3	704 aa		18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	NOC2L	Q9Y3T9	749 aa	Known RBP	18.35	■□□□□ 0.53
PHGDH-223	ENST00000641597	GAS7	O60861	476 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	PPFIA4	O75335	1185 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	RAD17	O75943	681 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	DRAP1	Q14919	205 aa	Predicted RBP	18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	HOOK2	Q96ED9	719 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	GPR88	Q9GZN0	384 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	CENPH	Q9H3R5	247 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	SEPT11	Q9NVA2	429 aa	Known RBP	18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	TMEM59L	Q9UK28	342 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597		F8VZ95	297 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	RPL13	P26373	211 aa	Known RBP	18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	GUCY1A3	Q02108	690 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	ODR4	Q5SWX8	454 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	CFAP58	Q5T655	872 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	BTNL9	Q6UXG8	535 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	PEX26	Q7Z412	305 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	ARHGEF26	Q96DR7	871 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	PARVG	Q9HBI0	331 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	DNAJC12	Q9UKB3	198 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	ZBTB21	Q9ULJ3	1066 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	PPP1R9A	Q9ULJ8	1098 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	NENF	Q9UMX5	172 aa		18.34	■□□□□ 0.53
PHGDH-223	ENST00000641597	SART1	O43290	800 aa	Known RBP	18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	ZEB2	O60315	1214 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	CYP3A4	P08684	503 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	H2AFZ	P0C0S5	128 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	FMO5	P49326	533 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	PAK2	Q13177	524 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	AADACL2	Q6P093	401 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	H2AFV	Q71UI9	128 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	FAM178B	Q8IXR5	827 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	BCAS4	Q8TDM0	211 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	ACP6	Q9NPH0	428 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	OLFML3	Q9NRN5	406 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	PCNT	O95613	3336 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	BUB1B	O60566	1050 aa	Predicted RBP	18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	FLOT1	O75955	427 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	TNFRSF8	P28908	595 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	PRKCI	P41743	596 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	GLE1	Q53GS7	698 aa	Known RBP	18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	ZNF720	Q7Z2F6	126 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	IL31RA	Q8NI17	732 aa		18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	RNPC3	Q96LT9	517 aa	Known RBP	18.33	■□□□□ 0.52
PHGDH-223	ENST00000641597	TRIM31	Q9BZY9	425 aa		18.33	■□□□□ 0.52

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