RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	ABHD14A-ACY1	A0A1B0GW23	586 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	PP2D1	A8MPX8	630 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	SLC34A2	O95436	690 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	RPA1	P27694	616 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	DEFB103A	P81534	67 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	PIGO	Q8TEQ8	1089 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	SEPT8	Q92599	483 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	MMTAG2	Q9BU76	263 aa	Known RBP	29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	IFIH1	Q9BYX4	1025 aa	Known RBP	29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	MTIF3	Q9H2K0	278 aa	Known RBP	29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	GBF1	Q92538	1859 aa		29.85	■■■□□ 2.37
VEGFA-231	ENST00000640499	CDC25A	P30304	524 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	IKBKE	Q14164	716 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	KIZ	Q2M2Z5	673 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	TMEM266	Q2M3C6	531 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	TSHZ1	Q6ZSZ6	1077 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	TMCO2	Q7Z6W1	182 aa	Predicted RBP	29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	ANKEF1	Q9NU02	776 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	LRWD1	Q9UFC0	647 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	CLIC4	Q9Y696	253 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	SQOR	Q9Y6N5	450 aa		29.84	■■■□□ 2.37
VEGFA-231	ENST00000640499	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	CD52	P31358	61 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	RABGGTB	P53611	331 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	PKP1	Q13835	747 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	SF3A1	Q15459	793 aa	Known RBP	29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	XKR9	Q5GH70	373 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	POTEG	Q6S5H5	508 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	DTHD1	Q6ZMT9	781 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	OTUD6A	Q7L8S5	288 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	ZNF668	Q96K58	619 aa	Predicted RBP	29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	PBX4	Q9BYU1	374 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	GINS2	Q9Y248	185 aa		29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499	NOC2L	Q9Y3T9	749 aa	Known RBP	29.83	■■■□□ 2.37
VEGFA-231	ENST00000640499		M0QZ92	97 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	XRCC6	P12956	609 aa	Known RBP eCLIP	29.82	■■■□□ 2.36	1e-10	■□□□□ 8.4
VEGFA-231	ENST00000640499	ATP2A2	P16615	1042 aa	Known RBP	29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	TMOD1	P28289	359 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	RARRES1	P49788	294 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	CRYBB1	P53674	252 aa	Predicted RBP	29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	NLRP11	P59045	1033 aa	Known RBP	29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	PTPA	Q15257	358 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	OSMR	Q99650	979 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	XPNPEP1	Q9NQW7	623 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	AKT3	Q9Y243	479 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	PPME1	Q9Y570	386 aa		29.82	■■■□□ 2.36
VEGFA-231	ENST00000640499	GPC3	P51654	580 aa		29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	GRIN1	Q05586	938 aa		29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	ARL6IP4	Q66PJ3	421 aa	Known RBP	29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	RTN4RL1	Q86UN2	441 aa	Predicted RBP	29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	PHOSPHO2	Q8TCD6	241 aa		29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	TMX1	Q9H3N1	280 aa		29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	BMP2K	Q9NSY1	1161 aa	Predicted RBP	29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	PADI3	Q9ULW8	664 aa		29.81	■■■□□ 2.36
VEGFA-231	ENST00000640499	HSP90AA1	P07900	732 aa	Known RBP	29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	MYOG	P15173	224 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	RFC5	P40937	340 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	GPR153	Q6NV75	609 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	KSR1	Q8IVT5	923 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	USP38	Q8NB14	1042 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	ERMN	Q8TAM6	284 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	LINC01599	Q8WXQ3	324 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	TMEM143	Q96AN5	459 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	MAP7D2	Q96T17	732 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	SLC9A7	Q96T83	725 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	ERVK-5	Q9HDB9	667 aa		29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	SUCLA2	Q9P2R7	463 aa	Predicted RBP	29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	YBX2	Q9Y2T7	364 aa	Known RBP	29.8	■■■□□ 2.36
VEGFA-231	ENST00000640499	VWA3A	A6NCI4	1184 aa		29.79	■■■□□ 2.36
VEGFA-231	ENST00000640499	CCT6A	P40227	531 aa	Known RBP	29.79	■■■□□ 2.36
VEGFA-231	ENST00000640499	HERC6	Q8IVU3	1022 aa		29.79	■■■□□ 2.36
VEGFA-231	ENST00000640499	APBB2	Q92870	758 aa		29.79	■■■□□ 2.36
VEGFA-231	ENST00000640499	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	29.79	■■■□□ 2.36
VEGFA-231	ENST00000640499	CHD9	Q3L8U1	2897 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	POLG	P54098	1239 aa	Predicted RBP	29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	EMC2	Q15006	297 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499		Q7L0L9	218 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	FAM228A	Q86W67	206 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	SNX29	Q8TEQ0	813 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	SLC7A3	Q8WY07	619 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	NACC1	Q96RE7	527 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	USP28	Q96RU2	1077 aa		29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	DBR1	Q9UK59	544 aa	Known RBP	29.78	■■■□□ 2.36
VEGFA-231	ENST00000640499	ENPP3	O14638	875 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	EFCAB14	O75071	495 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	MUT	P22033	750 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	DNAJB2	P25686	324 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	KCNJ6	P48051	423 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	FOXD4L5	Q5VV16	416 aa	Predicted RBP	29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	HAUS3	Q68CZ6	603 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	RAB34	Q9BZG1	259 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	TTYH1	Q9H313	450 aa	Predicted RBP	29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	KIAA1024	Q9UPX6	916 aa		29.77	■■■□□ 2.36
VEGFA-231	ENST00000640499	MGEA5	O60502	916 aa		29.76	■■■□□ 2.35
VEGFA-231	ENST00000640499	KCNK18	Q7Z418	384 aa		29.76	■■■□□ 2.35
VEGFA-231	ENST00000640499	PRPF31	Q8WWY3	499 aa	Known RBP	29.76	■■■□□ 2.35
VEGFA-231	ENST00000640499	PNMA5	Q96PV4	448 aa		29.76	■■■□□ 2.35
VEGFA-231	ENST00000640499	JPH2	Q9BR39	696 aa	Predicted RBP	29.76	■■■□□ 2.35
VEGFA-231	ENST00000640499	ST3GAL5	Q9UNP4	418 aa		29.76	■■■□□ 2.35

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