RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 ATF2P15336 505 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 AMPD2Q01433 879 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 RPS6KA2Q15349 733 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 LRRC31Q6UY01 552 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 CCDC121Q6ZUS5 278 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 KCTD6Q8NC69 237 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 RAB3IPQ96QF0 476 aaPredicted RBP10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 PIN4Q9Y237 131 aaKnown RBP10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 BUB1O43683 1085 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 ST8SIA6P61647 398 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 GIMAP7Q8NHV1 300 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 MXD3Q9BW11 206 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 MAD1L1Q9Y6D9 718 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 MCF2LO15068 1137 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 KRT1P04264 644 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 EVCP57679 992 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 MESDQ14696 234 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 DENND2CQ68D51 928 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 FAM76AQ8TAV0 307 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 GLT1D1Q96MS3 346 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 TMEM39BQ9GZU3 492 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
CACNA1D-230ENST00000640483 DYNC1I1O14576 645 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 GGPS1O95749 300 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 CYBBP04839 570 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 EFNA5P52803 228 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 CPVLQ9H3G5 476 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 VCPKMTQ9H867 229 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 BARHL2Q9NY43 387 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 GSG1L2A8MUP6 293 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 GSTA1P08263 222 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 GSTA2P09210 222 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 USP11P51784 963 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 NR1H3Q13133 447 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 ARHGEF18Q6ZSZ5 1173 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 SFI1A8K8P3 1242 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 SLC16A4O15374 487 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 BAATQ14032 418 aaPredicted RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 DNAJC21Q5F1R6 531 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 ERICH1Q86X53 443 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 SGK1O00141 431 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 STXBP3O00186 592 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 UPP2O95045 317 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 CTSHP09668 335 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 CYB5R4Q7L1T6 521 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 LXNQ9BS40 222 aa10.06□□□□□ -0.8
CACNA1D-230ENST00000640483 RASSF7Q02833 373 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 DGKDQ16760 1214 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 BZW1Q7L1Q6 419 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RWDD2AQ9UIY3 292 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RALAP11233 206 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SAT1P21673 171 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 ERO1BQ86YB8 467 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 KRT222Q8N1A0 295 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TRIM62Q9BVG3 475 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 THAP9Q9H5L6 903 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 MTMR4Q9NYA4 1195 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 MAGEB2O15479 319 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TADA2AO75478 443 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 CCNE1P24864 410 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 CDC25AP30304 524 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SLC10A5Q5PT55 438 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 PPP4R4Q6NUP7 873 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TOGARAM2Q6ZUX3 1019 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TNS4Q8IZW8 715 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 TMEM260Q9NX78 707 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 ATP11BQ9Y2G3 1177 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 HPDP32754 393 aaPredicted RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 COG7P83436 770 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 DNAAF3Q8N9W5 541 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 XXYLT1Q8NBI6 393 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RAD54LQ92698 747 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 EDEM3Q9BZQ6 932 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 STN1Q9H668 368 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SAR1BQ9Y6B6 198 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SIGLEC1Q9BZZ2 1709 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 AP3M2P53677 418 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 RABL6Q3YEC7 729 aaPredicted RBP10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 GNASQ5JWF2 1037 aa10.05□□□□□ -0.8
CACNA1D-230ENST00000640483 SEPT1Q8WYJ6 367 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms