RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 DNAJC21Q5F1R6 531 aaKnown RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SDCCAG8Q86SQ7 713 aaPredicted RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 RYBPQ8N488 228 aaPredicted RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 PBKQ96KB5 322 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 RSPH14Q9UHP6 348 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SART1O43290 800 aaKnown RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 GFPT2O94808 682 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 KPNA2P52292 529 aaKnown RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 IER5Q5VY09 327 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 CCNYQ8ND76 341 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 FAM114A2Q9NRY5 505 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 LARGE1O95461 756 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 NR3C2P08235 984 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 RECQLP46063 649 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 FCGRTP55899 365 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 BAATQ14032 418 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 VEPH1Q14D04 833 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 GUF1Q8N442 669 aaKnown RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 RNF40O75150 1001 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 S100BP04271 92 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 CALB1P05937 261 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 EHHADHQ08426 723 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 ASPHQ12797 758 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 RDM1Q8NG50 284 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 MAGOHBQ96A72 148 aaKnown RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 KIF9Q9HAQ2 790 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 STAP1Q9ULZ2 295 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 KIAA1210Q9ULL0 1709 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 PLSCR1O15162 318 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 TROVE2P10155 538 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCN1B-208ENST00000640135 RPS6KA2Q15349 733 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 KAZNQ674X7 775 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 LRRC31Q6UY01 552 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 EXOC4Q96A65 974 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 TACC3Q9Y6A5 838 aa11.88□□□□□ -0.51
SCN1B-208ENST00000640135 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 GOLGA8JA6NMD2 632 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 GGPS1O95749 300 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 KRT1P04264 644 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 RARBP10826 455 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 RFC5P40937 340 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 COG7P83436 770 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 ANKRD20A3Q5VUR7 823 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 NUDT18Q6ZVK8 323 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
SCN1B-208ENST00000640135 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 PRR12Q9ULL5 1215 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 CTNNA1P35221 906 aaKnown RBP11.87□□□□□ -0.51
SCN1B-208ENST00000640135 PDIA6Q15084 440 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 RNF219Q5W0B1 726 aaPredicted RBP11.87□□□□□ -0.51
SCN1B-208ENST00000640135 KCTD6Q8NC69 237 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 OGFRQ9NZT2 677 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 SLC16A4O15374 487 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 SRGNP10124 158 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
SCN1B-208ENST00000640135 TFDP2Q14188 446 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 FAM133AQ8N9E0 248 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 STMN2Q93045 179 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 ZDHHC15Q96MV8 337 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 RIT2Q99578 217 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
SCN1B-208ENST00000640135 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
SCN1B-208ENST00000640135 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 POTECB2RU33 542 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 PGRMC1O00264 195 aaKnown RBP11.86□□□□□ -0.51
SCN1B-208ENST00000640135 COASYQ13057 564 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 PPP2R5CQ13362 524 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 KRT39Q6A163 491 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 C4orf50Q6ZRC1 276 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 ARHGEF18Q6ZSZ5 1173 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 GRAMD1CQ8IYS0 662 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 EHD2Q9NZN4 543 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 E9PMD0 336 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 SGK1O00141 431 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 CDC27P30260 824 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 NNMTP40261 264 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 EPHB1P54762 984 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms