RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	MKRN3	Q13064	507 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MKRN4P	Q13434	485 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MESD	Q14696	234 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TMTC3	Q6ZXV5	915 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MYOCD	Q8IZQ8	938 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	JDP2	Q8WYK2	163 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CCDC124	Q96CT7	223 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	RMDN2	Q96LZ7	410 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ADAM33	Q9BZ11	813 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	PUS7L	Q9H0K6	701 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	PIDD1	Q9HB75	910 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.19	□□□□□ -0.46	1e-18	■■■■■ 447.2
SPIN3-231	ENST00000639895	FAM205C	A6NFA0	338 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	RNF225	M0QZC1	329 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TOM1	O60784	492 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	GUCY1A2	P33402	732 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CBX3	Q13185	183 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ERMARD	Q5T6L9	678 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	SLC26A7	Q8TE54	656 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CASP10	Q92851	521 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TLR10	Q9BXR5	811 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	FAM192A	Q9GZU8	254 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	UNC45A	Q9H3U1	944 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TCEAL9	Q9UHQ7	104 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TRMT112	Q9UI30	125 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	SIGLEC1	Q9BZZ2	1709 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	PTPRU	Q92729	1446 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	E2F6	O75461	281 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	MAGEA8	P43361	318 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	DMPK	Q09013	629 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	MPP3	Q13368	585 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	FAM83B	Q5T0W9	1011 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	MAP3K21	Q5TCX8	1036 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	IZUMO2	Q6UXV1	221 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	RASGRP4	Q8TDF6	673 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	LZIC	Q8WZA0	190 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	DRC3	Q9H069	523 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	UBN1	Q9NPG3	1134 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	CLIC5	Q9NZA1	410 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	ADAM22	Q9P0K1	906 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	PPIP5K2	O43314	1243 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	SNX3	O60493	162 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	CCDC22	O60826	627 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	PLCG2	P16885	1265 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	COPB2	P35606	906 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	BARGIN	Q6ZT62	677 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	CCNJL	Q8IV13	435 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	MTMR8	Q96EF0	704 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	TRIM55	Q9BYV6	548 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	CYP39A1	Q9NYL5	469 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	REXO2	Q9Y3B8	237 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	PXDNL	A1KZ92	1463 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	TBCA	O75347	108 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	IFNB1	P01574	187 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	LINGO3	P0C6S8	592 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	TEC	P42680	631 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	CD302	Q8IX05	232 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	FNBP1	Q96RU3	617 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	NPHS2	Q9NP85	383 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	TYW1	Q9NV66	732 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	LMCD1	Q9NZU5	365 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZSWIM5	Q9P217	1185 aa		12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-231	ENST00000639895	ADAMTS13	Q76LX8	1427 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895		F8VZ95	297 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	NDC80	O14777	642 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	MCF2L	O15068	1137 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	NPTXR	O95502	500 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	PI16	Q6UXB8	463 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	WDR75	Q8IWA0	830 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	GFM2	Q969S9	779 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	PABPC3	Q9H361	631 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	KANSL2	Q9H9L4	492 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	GDF3	Q9NR23	364 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	SPATA31D1	Q6ZQQ2	1576 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	UBE2Q2L	H0YL09	131 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	KDM1A	O60341	852 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	S100B	P04271	92 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	CPA2	P48052	419 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	MRPS9	P82933	396 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	KRT80	Q6KB66	452 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	SNX29	Q8TEQ0	813 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	GLG1	Q92896	1179 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	PRM3	Q9NNZ6	103 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	UTP6	Q9NYH9	597 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	TMCO1	Q9UM00	188 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZNF268	Q14587	947 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	LRRC24	Q50LG9	513 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	ISLR2	Q6UXK2	745 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	TRIM67	Q6ZTA4	783 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	ICA1L	Q8NDH6	482 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	MPHOSPH6	Q99547	160 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	CNOT8	Q9UFF9	292 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	ANAPC5	Q9UJX4	755 aa		12.17	□□□□□ -0.46
SPIN3-231	ENST00000639895	PCDHB13	Q9Y5F0	798 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms