RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 CALM1P0DP23 149 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 CALM2P0DP24 149 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 CALM3P0DP25 149 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 GNAT2P19087 354 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 KCNA3P22001 575 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 ITGA6P23229 1130 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 DRG2P55039 364 aaKnown RBP12.99□□□□□ -0.33
CAPN3-221ENST00000638141 PKN1Q16512 942 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-221ENST00000638141 SMYD1Q8NB12 490 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 CARD9Q9H257 536 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 TTC7AQ9ULT0 858 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-221ENST00000638141 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 GM2AP17900 193 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 KLRC1P26715 233 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 SERPINB4P48594 390 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 BICDL1Q6ZP65 573 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 NAPBQ9H115 298 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 ZDHHC18Q9NUE0 388 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 FGFR1OP2Q9NVK5 253 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
CAPN3-221ENST00000638141 TRIM33Q9UPN9 1127 aa12.99□□□□□ -0.33
CAPN3-221ENST00000638141 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
CAPN3-221ENST00000638141 KCNK3O14649 394 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ADRA2BP18089 450 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 RASA1P20936 1047 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ADORA1P30542 326 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 RASSF2P50749 326 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 PMS2P54278 862 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 PPARDQ03181 441 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 MCL1Q07820 350 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 SCARF1Q14162 830 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 SLC18A3Q16572 532 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ROPN1BQ9BZX4 212 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 QTRT2Q9H974 415 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ROPN1Q9HAT0 212 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ATP8A1Q9Y2Q0 1164 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 BZW2Q9Y6E2 419 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 DOCK2Q92608 1830 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 GLI3P10071 1580 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 BCORQ6W2J9 1755 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 TCRBV5S4A2TA0A5A2 114 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 EPHB6O15197 1021 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 HNRNPCL1O60812 293 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 IDO1P14902 403 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 MAGEA10P43363 369 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 FUT2Q10981 343 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 RCN2Q14257 317 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 EARS2Q5JPH6 523 aaKnown RBP12.98□□□□□ -0.33
CAPN3-221ENST00000638141 DAB2IPQ5VWQ8 1189 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 CKAP2Q8WWK9 683 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 NLRC4Q9NPP4 1024 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
CAPN3-221ENST00000638141 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
CAPN3-221ENST00000638141 TCP11X1B4DZS4 312 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 ATP9AO75110 1047 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 PDE6AP16499 860 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 PHEXP78562 749 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 ZNF772Q68DY9 489 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-221ENST00000638141 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 CCDC97Q96F63 343 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-221ENST00000638141 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
CAPN3-221ENST00000638141 RMI1Q9H9A7 625 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 CEP72Q9P209 647 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
CAPN3-221ENST00000638141 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
CAPN3-221ENST00000638141 FAM187AA6NFU0 413 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 BTBD19C9JJ37 291 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 LAD1O00515 517 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 KRIT1O00522 736 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 CETN3O15182 167 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 CEP104O60308 925 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 UQCRFS1P1P0C7P4 283 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-221ENST00000638141 NPY5RQ15761 445 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
CAPN3-221ENST00000638141 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms