RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TMEM62Q0P6H9 643 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 BCAS4Q8TDM0 211 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ADA2Q9NZK5 511 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 ARHGAP25P42331 645 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 LRRC8AQ8IWT6 810 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 SLC35F6Q8N357 371 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 CHEK2O96017 543 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 CAPN1P07384 714 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 TCF3P15923 654 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PDXDC2PQ6P474 469 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
CACNA1A-253ENST00000637927 TUBBP07437 444 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 PSMA2P25787 234 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 FBXW10Q5XX13 1052 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 EFCAB13Q8IY85 973 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 THEM5Q8N1Q8 247 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 CENPTQ96BT3 561 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 USE1Q9NZ43 259 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 BMP3P12645 472 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 SLC9A1P19634 815 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 ESRRGP62508 458 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 KLC2Q9H0B6 622 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 MYO1EQ12965 1108 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 PASKQ96RG2 1323 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 NUP93Q8N1F7 819 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
CACNA1A-253ENST00000637927 P4HA2O15460 535 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PKN3Q6P5Z2 889 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 CATSPER4Q7RTX7 472 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PDE8BO95263 885 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PCCAP05165 728 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PAMP19021 973 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 NNMTP40261 264 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PDE11AQ9HCR9 933 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 CHCHD3Q9NX63 227 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 ARHGAP10A1A4S6 786 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 SOWAHDA6NJG2 315 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 EFCAB8A8MWE9 144 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 H2AFZP0C0S5 128 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 MAP3K7CLP57077 242 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 IL9RQ01113 521 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 SGO1Q5FBB7 561 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 H2AFVQ71UI9 128 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 FGFR1OP2Q9NVK5 253 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 ADGRA2Q96PE1 1338 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 NUP160Q12769 1436 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 LTKP29376 864 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 AOC3Q16853 763 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 ZBTB18Q99592 522 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 SELENONQ9NZV5 590 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 ANKRD65E5RJM6 399 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 MEFVO15553 781 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 ZBED1O96006 694 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 PEX3P56589 373 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 SUPT20HL1Q3ZLR7 823 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 TRIM60Q495X7 471 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 FLCNQ8NFG4 579 aa18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 SH3RF3Q8TEJ3 882 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-253ENST00000637927 XPOTO43592 962 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 HS6ST3Q8IZP7 471 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 ALG13Q9NP73 1137 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 MYO1GB0I1T2 1018 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 RPAINQ86UA6 219 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 BCL2L14Q9BZR8 327 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 SP110Q9HB58 689 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 ZNF215Q9UL58 517 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 CDC37Q16543 378 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 KIZQ2M2Z5 673 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 RHPN2Q8IUC4 686 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 SLC17A8Q8NDX2 589 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 FLAD1Q8NFF5 587 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 RMDN1Q96DB5 314 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 PCSK1NQ9UHG2 260 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 EPN1Q9Y6I3 576 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 GOLGA8KD6RF30 607 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 CC2D1AQ6P1N0 951 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 CYFIP1Q7L576 1253 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 HOMER3Q9NSC5 361 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 BABAM1Q9NWV8 329 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 MAN1B1Q9UKM7 699 aa18.15■□□□□ 0.5
CACNA1A-253ENST00000637927 LINC00854A0A1B0GVQ3 168 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms