RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 A0A1W2PP64 1363 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 LRRIQ3A6PVS8 624 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 GGPS1O95749 300 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 MXD4Q14582 209 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 HACD3Q9P035 362 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 ZSCAN9O15535 394 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 ORC4O43929 436 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 ARIH2O95376 493 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 PSMA4P25789 261 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 FAF2Q96CS3 445 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 DYDC2Q96IM9 177 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 ACSL3O95573 720 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 DDX28Q9NUL7 540 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 FRMPD2Q68DX3 1309 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 USP17L21D6R901 530 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 GUCY1A3Q02108 690 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 UBE2TQ9NPD8 197 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 PNMA3Q9UL41 463 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 PSAPP07602 524 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 TBXAS1P24557 533 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 A0A0G2JND7 137 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 RAB14P61106 215 aa19.23■□□□□ 0.67
CACNA1A-247ENST00000637769 DYNLT1P63172 113 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 RUNX1T1Q06455 604 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 CEP95Q96GE4 821 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 TMEM63CQ9P1W3 806 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 TOMM70O94826 608 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 TCF3P15923 654 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 TAP1Q03518 808 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 KCNA1Q09470 495 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 CASP8Q14790 479 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 CCDC90BQ9GZT6 254 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 KLHL8Q9P2G9 620 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 KRT75O95678 551 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 AASDHQ4L235 1098 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 GANCQ8TET4 914 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 ABCF3Q9NUQ8 709 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 UBXN8O00124 270 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 HOXC9P31274 260 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 C19orf60Q96EN9 201 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 COBLO75128 1261 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 NDUFA10O95299 355 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 CENPPQ6IPU0 288 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 RUBCNLQ9H714 662 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 ASNSD1Q9NWL6 643 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 PCDHA13Q9Y5I0 950 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 MYOM2P54296 1465 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 SUPT20HL1Q3ZLR7 823 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 TBC1D4O60343 1298 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 PHACTR3Q96KR7 559 aa19.22■□□□□ 0.67
CACNA1A-247ENST00000637769 PPCSQ9HAB8 311 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 ADA2Q9NZK5 511 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 UHMK1Q8TAS1 419 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 LAMC2Q13753 1193 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TFDP2Q14188 446 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TESK2Q96S53 571 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 MAFGO15525 162 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 EIF2B5Q13144 721 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 DMC1Q14565 340 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 RWDD4Q6NW29 188 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 FAM32AQ9Y421 112 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 GPATCH8Q9UKJ3 1502 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 ARMC2Q8NEN0 867 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 SMYD3Q9H7B4 428 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TOPORSQ9NS56 1045 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 LZTS3O60299 673 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 APOA4P06727 396 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TRIM72Q6ZMU5 477 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 PRUNE1Q86TP1 453 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 DDX50Q9BQ39 737 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 GTSE1Q9NYZ3 720 aa19.21■□□□□ 0.67
CACNA1A-247ENST00000637769 TAF5LO75529 589 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ZRANB2O95218 330 aaKnown RBP eCLIP19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ZAP70P43403 619 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 HEXIM2Q96MH2 286 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 GOLGA8SH3BPF8 625 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 SYNMO15061 1565 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 PMS1P54277 932 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 GRID2IPA4D2P6 1211 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 FMNL1O95466 1100 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ZNF18P17022 549 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 DIAPH2O60879 1101 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 MOCS3O95396 460 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ERICH1Q86X53 443 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 PLD3Q8IV08 490 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 KANSL2Q9H9L4 492 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 ZNF197O14709 1029 aa19.2■□□□□ 0.66
CACNA1A-247ENST00000637769 JAK3P52333 1124 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms