RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 NAP1L2Q9ULW6 460 aaPredicted RBP20.27■□□□□ 0.84
CIITA-215ENST00000637439 MYH9P35579 1960 aaKnown RBP20.26■□□□□ 0.83
CIITA-215ENST00000637439 LOC730098B7Z3J9 87 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 MAGEB2O15479 319 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 FGF18O76093 207 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 GLP2RO95838 553 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 PSAPP07602 524 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 SRGAP2BP0DMP2 458 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 LAG3P18627 525 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 ATP4AP20648 1035 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
CIITA-215ENST00000637439 FAM189BP81408 668 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 KIZQ2M2Z5 673 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 FAM102BQ5T8I3 360 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 REXO1Q8N1G1 1221 aaKnown RBP20.26■□□□□ 0.83
CIITA-215ENST00000637439 METTL13Q8N6R0 699 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 COLGALT1Q8NBJ5 622 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 FAM167AQ96KS9 214 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 OSMRQ99650 979 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 TYW1Q9NV66 732 aaKnown RBP20.26■□□□□ 0.83
CIITA-215ENST00000637439 BARX2Q9UMQ3 279 aaPredicted RBP20.26■□□□□ 0.83
CIITA-215ENST00000637439 USP15Q9Y4E8 981 aaPredicted RBP20.26■□□□□ 0.83
CIITA-215ENST00000637439 PCDHA10Q9Y5I2 948 aa20.26■□□□□ 0.83
CIITA-215ENST00000637439 HOXA2O43364 376 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 GNA11P29992 359 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
CIITA-215ENST00000637439 NHLH1Q02575 133 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 PKN1Q16512 942 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 BMP8AQ7Z5Y6 402 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 FAM228AQ86W67 206 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 PHF7Q9BWX1 381 aaPredicted RBP20.25■□□□□ 0.83
CIITA-215ENST00000637439 PUF60Q9UHX1 559 aaKnown RBP20.25■□□□□ 0.83
CIITA-215ENST00000637439 LZTS1Q9Y250 596 aa20.25■□□□□ 0.83
CIITA-215ENST00000637439 GPR32O75388 356 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 VTNP04004 478 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 ATF7P17544 494 aaPredicted RBP20.24■□□□□ 0.83
CIITA-215ENST00000637439 TMOD1P28289 359 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 CBX2Q14781 532 aaPredicted RBP20.24■□□□□ 0.83
CIITA-215ENST00000637439 DUSP6Q16828 381 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 MAP7D2Q96T17 732 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 TMEM117Q9H0C3 514 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 PCDHGC5Q9Y5F6 944 aa20.24■□□□□ 0.83
CIITA-215ENST00000637439 ZSCAN20P17040 1043 aaPredicted RBP20.23■□□□□ 0.83
CIITA-215ENST00000637439 MRE11P49959 708 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 PLCB3Q01970 1234 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 DSC3Q14574 896 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 TRIM67Q6ZTA4 783 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 PPP1R16BQ96T49 567 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 CWH43Q9H720 699 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 SAMM50Q9Y512 469 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 ZNF318Q5VUA4 2279 aa20.23■□□□□ 0.83
CIITA-215ENST00000637439 WDR64B1ANS9 1081 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 FSCN2O14926 492 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 PER2O15055 1255 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 PRPF3O43395 683 aaKnown RBP20.22■□□□□ 0.83
CIITA-215ENST00000637439 CDC45O75419 566 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 FGFR1P11362 822 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 CIITAP33076 1130 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 PPM1AP35813 382 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 ERVFC1P60507 584 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 AKAP17AQ02040 695 aaKnown RBP20.22■□□□□ 0.83
CIITA-215ENST00000637439 PRR16Q569H4 304 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 TRMT1LQ7Z2T5 733 aaKnown RBP20.22■□□□□ 0.83
CIITA-215ENST00000637439 ABI1Q8IZP0 508 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
CIITA-215ENST00000637439 NGRNQ9NPE2 291 aaKnown RBP20.22■□□□□ 0.83
CIITA-215ENST00000637439 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 WDFY4Q6ZS81 3184 aa20.22■□□□□ 0.83
CIITA-215ENST00000637439 TMEM221A6NGB7 291 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 M0R296 226 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
CIITA-215ENST00000637439 CLCN3P51790 818 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 NLRP11P59045 1033 aaKnown RBP20.21■□□□□ 0.83
CIITA-215ENST00000637439 ZXDAP98168 799 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 KRT17Q04695 432 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 APOBRQ0VD83 1088 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 EFCAB12Q6NXP0 572 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 TMEM184AQ6ZMB5 413 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 CCDC148Q8NFR7 591 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 RASGRP4Q8TDF6 673 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 SUSD6Q92537 303 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 PRRX2Q99811 253 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 TECTAO75443 2155 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 NID2Q14112 1375 aa20.21■□□□□ 0.83
CIITA-215ENST00000637439 Q6ZUG5 572 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
CIITA-215ENST00000637439 LRRC43Q8N309 656 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 PBXIP1Q96AQ6 731 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 RPGRIP1Q96KN7 1286 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 ZNF558Q96NG5 402 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 CASD1Q96PB1 797 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 ENTPD7Q9NQZ7 604 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 HCSTQ9UBK5 93 aa20.2■□□□□ 0.82
CIITA-215ENST00000637439 PLPP4Q5VZY2 271 aa20.19■□□□□ 0.82
CIITA-215ENST00000637439 KCNT2Q6UVM3 1135 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms