RNA–Protein interactions for RNA: ENST00000637434.1

SPTAN1-235, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-235ENST00000637434 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-235ENST00000637434 RAB34Q9BZG1 259 aa13.64□□□□□ -0.23
SPTAN1-235ENST00000637434 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
SPTAN1-235ENST00000637434 TRPV2Q9Y5S1 764 aa13.64□□□□□ -0.23
SPTAN1-235ENST00000637434 MYH9P35579 1960 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 GRXCR1A8MXD5 290 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 E9PMD0 336 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 M0QZ92 97 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 MAGEB2O15479 319 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 BRD1O95696 1058 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 RPA1P27694 616 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 LPIN1Q14693 890 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 EMC2Q15006 297 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 STK38Q15208 465 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 KRT79Q5XKE5 535 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 LINC01465Q8N7H1 131 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 DBF4BQ8NFT6 615 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 TANC1Q9C0D5 1861 aa13.63□□□□□ -0.23
SPTAN1-235ENST00000637434 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 MAFO75444 373 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 FGFR4P22455 802 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 TMOD1P28289 359 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 CD52P31358 61 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 RFC2P35250 354 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 RARRES1P49788 294 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 NLRP11P59045 1033 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 PDIA5Q14554 519 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 FAM26DQ5JW98 314 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 IER5Q5VY09 327 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 RHPN2Q8IUC4 686 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 NLRP4Q96MN2 994 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 KAT6AQ92794 2004 aa13.62□□□□□ -0.23
SPTAN1-235ENST00000637434 ARHGEF35A5YM69 484 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 CAND2O75155 1236 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 LYPLA2O95372 231 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 BMP15O95972 392 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 CXCL10P02778 98 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 GRB10Q13322 594 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 FBXO47Q5MNV8 452 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 FAM117BQ6P1L5 589 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 CABP7Q86V35 215 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 NLRP7Q8WX94 980 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 EPSTI1Q96J88 318 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 NACC1Q96RE7 527 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 IFIH1Q9BYX4 1025 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 BHMT2Q9H2M3 363 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 DHX33Q9H6R0 707 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 ANKEF1Q9NU02 776 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 NOC2LQ9Y3T9 749 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 WDR81Q562E7 1941 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 IGKV6-21A0A0C4DH24 114 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 GPR32O75388 356 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 DEFB103AP81534 67 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 NFX1Q12986 1120 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 SLC39A14Q15043 492 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 CNKSR3Q6P9H4 555 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■□□□ 12.2
SPTAN1-235ENST00000637434 LINC00301Q8NCQ3 95 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 LRRC15Q8TF66 581 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 HERVK_113Q902F9 699 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 SEPT8Q92599 483 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 MTRQ99707 1265 aa13.61□□□□□ -0.23
SPTAN1-235ENST00000637434 A0A087WZ62 844 aa13.6□□□□□ -0.23
SPTAN1-235ENST00000637434 SPTLC2O15270 562 aa13.6□□□□□ -0.23
SPTAN1-235ENST00000637434 SRGAP2CP0DJJ0 459 aa13.6□□□□□ -0.23
SPTAN1-235ENST00000637434 ACTN1P12814 892 aa13.6□□□□□ -0.23
SPTAN1-235ENST00000637434 RFC5P40937 340 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms