RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 CCDC125Q86Z20 511 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 CCDC65Q8IXS2 484 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 ADAM7Q9H2U9 754 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 KANSL2Q9H9L4 492 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 KCNMB3Q9NPA1 279 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 DAAM1Q9Y4D1 1078 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 ESYT2A0FGR8 921 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 POTEMA6NI47 508 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 SHBGP04278 402 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 CLUL1Q15846 466 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 DUPD1Q68J44 220 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 CNOT7Q9UIV1 285 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-235ENST00000637004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 CCNHP51946 323 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 EDRF1Q3B7T1 1238 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 KCNK18Q7Z418 384 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 NELFCDQ8IXH7 590 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 PRMT1Q99873 361 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 ZDHHC18Q9NUE0 388 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 SRP68Q9UHB9 627 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 LAMB1P07942 1786 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 ICA1Q05084 483 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 EPB41L4BQ9H329 900 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 RASAL2Q9UJF2 1139 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 DHX34Q14147 1143 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 ZC3H3Q8IXZ2 948 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 IFT74Q96LB3 600 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 NUDT12Q9BQG2 462 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 SPATS2LQ9NUQ6 558 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-235ENST00000637004 SNX3O60493 162 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 ACTN1P12814 892 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 SMARCA1P28370 1054 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 GBP1P32455 592 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 EXOC3L4Q17RC7 722 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 CAPRIN2Q6IMN6 1127 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 BTNL9Q6UXG8 535 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 TAOK1Q7L7X3 1001 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 ABCF3Q9NUQ8 709 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 HDAC9Q9UKV0 1011 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 NENFQ9UMX5 172 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 LIN7AO14910 233 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC37A4O43826 429 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 SKAP2O75563 359 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 UBOX5O94941 541 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 NCALDP61601 193 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 FBXO33Q7Z6M2 555 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 TMEM109Q9BVC6 243 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 HOMER3Q9NSC5 361 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 CCDC87Q9NVE4 849 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 USP15Q9Y4E8 981 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-235ENST00000637004 NTSR2O95665 410 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 RARAP10276 462 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC9A1P19634 815 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 SARNPP82979 210 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 KLRC3Q07444 240 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 FRMD5Q7Z6J6 570 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 ECT2Q9H8V3 914 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 EMILIN3Q9NT22 766 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 MYH4Q9Y623 1939 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 TNS1Q9HBL0 1735 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 CCDC88AQ3V6T2 1871 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 DIAPH2O60879 1101 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 SUN1O94901 812 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 LUC7L3O95232 432 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 AFPP02771 609 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 PLTPP55058 493 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 KCNJ2P63252 427 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 IFI35P80217 286 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 ZNF483Q8TF39 744 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 KLHL29Q96CT2 875 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 ZNF570Q96NI8 536 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 NT5C3AQ9H0P0 336 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 CARD9Q9H257 536 aa16.86■□□□□ 0.29
CACNA1A-235ENST00000637004 ARMCX3Q9UH62 379 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms