RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 CREB3L3Q68CJ9 461 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 MCTP2Q6DN12 878 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 ARHGAP36Q6ZRI8 547 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 PTRH1Q86Y79 214 aaKnown RBP5.73□□□□□ -1.49
CLN5-212ENST00000636602 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
CLN5-212ENST00000636602 MYO1HQ8N1T3 1032 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 CLRN3Q8NCR9 226 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 DNERQ8NFT8 737 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 USP33Q8TEY7 942 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 RTFDC1Q9BY42 306 aaPredicted RBP5.73□□□□□ -1.49
CLN5-212ENST00000636602 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 EPB41L1Q9H4G0 881 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 PCIF1Q9H4Z3 704 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 NOB1Q9ULX3 412 aaKnown RBP5.73□□□□□ -1.49
CLN5-212ENST00000636602 LUC7L2Q9Y383 392 aaKnown RBP5.73□□□□□ -1.49
CLN5-212ENST00000636602 RWDD3Q9Y3V2 267 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 WASHC2AQ641Q2 1341 aa5.73□□□□□ -1.49
CLN5-212ENST00000636602 K7ESF4 209 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 KIF3BO15066 747 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 NKRFO15226 690 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLN5-212ENST00000636602 TGM5O43548 720 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 PPP1R11O60927 126 aaPredicted RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 AMY2AP04746 511 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 CT47B1P0C2W7 299 aaPredicted RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 AMY2BP19961 511 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 INHBEP58166 350 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 ERVK-21P61565 698 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 KLF1Q13351 362 aaPredicted RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 R3HDM1Q15032 1099 aaKnown RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 C14orf80Q86SX3 495 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 Q8N1Y9 231 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 KIAA1958Q8N8K9 716 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 TXNDC5Q8NBS9 432 aaKnown RBP5.72□□□□□ -1.49
CLN5-212ENST00000636602 GORASP1Q9BQQ3 440 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 C14orf119Q9NWQ9 140 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 IP6K2Q9UHH9 426 aa5.72□□□□□ -1.49
CLN5-212ENST00000636602 NPEPPSL1A6NEC2 478 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 GPR42O15529 346 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 B4GALT3O60512 393 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 HIP1RO75146 1068 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 SNUPNO95149 360 aaKnown RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 ZBTB48P10074 688 aaPredicted RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 CYP2C8P10632 490 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 ZSCAN20P17040 1043 aaPredicted RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 SLC9A1P19634 815 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 HNRNPA0Q13151 305 aaKnown RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 LZTR1Q8N653 840 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 PLEKHO2Q8TD55 490 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 JPH3Q8WXH2 748 aaPredicted RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLN5-212ENST00000636602 ELF4Q99607 663 aaPredicted RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 C11orf84Q9BUA3 381 aaPredicted RBP5.71□□□□□ -1.5
CLN5-212ENST00000636602 TOMM22Q9NS69 142 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLN5-212ENST00000636602 DSEQ9UL01 958 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 SPO11Q9Y5K1 396 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 X6R8D5 127 aa5.71□□□□□ -1.5
CLN5-212ENST00000636602 TCRBV5S4A2TA0A5A2 114 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 MAN2B1O00754 1011 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 SCDO00767 359 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 PEX14O75381 377 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 GNALP38405 381 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 SELENOPP49908 381 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 KIF11P52732 1056 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 TERF2Q15554 542 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 SPDYAQ5MJ70 313 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 FSTL4Q6MZW2 842 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 PGM2L1Q6PCE3 622 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 CABP7Q86V35 215 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 PNMA8AQ86V59 439 aaPredicted RBP5.7□□□□□ -1.5
CLN5-212ENST00000636602 CIR1Q86X95 450 aaPredicted RBP5.7□□□□□ -1.5
CLN5-212ENST00000636602 PEX11GQ96HA9 241 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 PCGF6Q9BYE7 350 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 ZNF341Q9BYN7 854 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 RHOBTB2Q9BYZ6 727 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 NUDT5Q9UKK9 219 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 SRPK3Q9UPE1 567 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 ZNF652Q9Y2D9 606 aa5.7□□□□□ -1.5
CLN5-212ENST00000636602 NOC2LQ9Y3T9 749 aaKnown RBP5.7□□□□□ -1.5
CLN5-212ENST00000636602 WDR33Q9C0J8 1336 aaKnown RBP5.7□□□□□ -1.5
CLN5-212ENST00000636602 GOLGA6CA6NDK9 693 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 GOLGA6BA6NDN3 693 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 KRIT1O00522 736 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 MUSKO15146 869 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 ABLIM3O94929 683 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 CFBP00751 764 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 C8BP07358 591 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 GOLGA6DP0CG33 693 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 LSP1P33241 339 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 SCAND1P57086 179 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 SMAD3P84022 425 aaKnown RBP5.69□□□□□ -1.5
CLN5-212ENST00000636602 MLC1Q15049 377 aa5.69□□□□□ -1.5
CLN5-212ENST00000636602 PCBP2Q15366 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLN5-212ENST00000636602 SMAD2Q15796 467 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms