RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	PPP1R3G	B7ZBB8	358 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HAS3	O00219	553 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KPNA6	O60684	536 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FAM13A	O94988	1023 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	C6orf222	P0C671	652 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HSPA8	P11142	646 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CD44	P16070	742 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CST5	P28325	142 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZNF165	P49910	485 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	POLG	P54098	1239 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PURA	Q00577	322 aa	Known RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	BEX3	Q00994	111 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	EMC2	Q15006	297 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FAM26F	Q5R3K3	315 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SFR1	Q86XK3	245 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ADSSL1	Q8N142	457 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FAM200A	Q8TCP9	573 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SLC7A3	Q8WY07	619 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KAT2B	Q92831	832 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DRC1	Q96MC2	740 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZHX3	Q9H4I2	956 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PARVG	Q9HBI0	331 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SPC25	Q9HBM1	224 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	XPNPEP3	Q9NQH7	507 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	OLFML3	Q9NRN5	406 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SEL1L	Q9UBV2	794 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TRPC6	Q9Y210	931 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FRMPD3	Q5JV73	1810 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	COL1A2	P08123	1366 aa		10.62	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MYH11	P35749	1972 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	IGKV6-21	A0A0C4DH24	114 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SFI1	A8K8P3	1242 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MSC	O60682	206 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAF	O75444	373 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PGK1	P00558	417 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PLS3	P13797	630 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	INSRR	P14616	1297 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ERCC5	P28715	1186 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PPP1R2	P41236	205 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PRCP	P42785	496 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RTP1	P59025	263 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TBC1D8B	Q0IIM8	1120 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	IQCB1	Q15051	598 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZNF484	Q5JVG2	852 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GNAS	Q5JWF2	1037 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FAM102B	Q5T8I3	360 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAEA	Q7L5Y9	396 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	EXOC8	Q8IYI6	725 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MYCT1	Q8N699	235 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RNF214	Q8ND24	703 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GLIS3	Q8NEA6	775 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KLHDC9	Q8NEP7	349 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SH3TC2	Q8TF17	1288 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KIFAP3	Q92845	792 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FIZ1	Q96SL8	496 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	FGFBP2	Q9BYJ0	223 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	C17orf75	Q9HAS0	396 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CBX8	Q9HC52	389 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	POLD4	Q9HCU8	107 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HMX1	Q9NP08	348 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SLC39A2	Q9NP94	309 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GPRC5C	Q9NQ84	441 aa		10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	LARS	Q9P2J5	1176 aa	Known RBP	10.61	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GOLGA6L3	A6NEY3	463 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GAS2	O43903	313 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ZEB2	O60315	1214 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	C22orf31	O95567	290 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MYL3	P08590	195 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAPT	P10636	758 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ARL2	P36404	184 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PSEN2	P49810	448 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	CASP5	P51878	434 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SOX10	P56693	466 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	STIM1	Q13586	685 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MFSD10	Q14728	455 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KIAA0753	Q2KHM9	967 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	ODR4	Q5SWX8	454 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	LHX8	Q68G74	356 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DHX40	Q8IX18	779 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	GUF1	Q8N442	669 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TRAPPC12	Q8WVT3	735 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MED15	Q96RN5	788 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	KATNAL1	Q9BW62	490 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	TBC1D7	Q9P0N9	293 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAPK8IP1	Q9UQF2	711 aa		10.6	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HTT	P42858	3142 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	RRN3P2	A6NIE6	340 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	PSMA7	O14818	248 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	IKBKB	O14920	756 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	EIF3D	O15371	548 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MAGEB2	O15479	319 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HSPA1A	P0DMV8	641 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	HSPA1B	P0DMV9	641 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SMIM10L2A	P0DMW4	78 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	SMIM10L2B	P0DMW5	78 aa		10.59	□□□□□ -0.71
CACNA1A-223	ENST00000636058	MYB	P10242	640 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms