RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 UBIAD1Q9Y5Z9 338 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 CNMDO75829 334 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 PRMT2P55345 433 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 CDKAL1Q5VV42 579 aa13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 CTU1Q7Z7A3 348 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 NPEPPSP55786 919 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 ADAMTS5Q9UNA0 930 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 A0A1B0GTH6 734 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 H3BRB1 525 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 MNS1Q8NEH6 495 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 STARD7Q9NQZ5 370 aa13.71□□□□□ -0.21
SYNGAP1-207ENST00000628646 ERLIN2O94905 339 aa13.71□□□□□ -0.22
SYNGAP1-207ENST00000628646 GNRH1P01148 92 aa13.71□□□□□ -0.22
SYNGAP1-207ENST00000628646 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.22
SYNGAP1-207ENST00000628646 ERCC5P28715 1186 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-207ENST00000628646 LRRC15Q8TF66 581 aa13.71□□□□□ -0.22
SYNGAP1-207ENST00000628646 MSCO60682 206 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 CIITAP33076 1130 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 TFDP1Q14186 410 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 CUEDC2Q9H467 287 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 ATP6V0A4Q9HBG4 840 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 DIS3Q9Y2L1 958 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 EXOC8Q8IYI6 725 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 TUFT1Q9NNX1 390 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 CTSHP09668 335 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 PPP2R5AQ15172 486 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 FAM26FQ5R3K3 315 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 RHPN2Q8IUC4 686 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 KMT5AQ9NQR1 393 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 MTIF2P46199 727 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 PEX3P56589 373 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 KCNG1Q9UIX4 513 aa13.7□□□□□ -0.22
SYNGAP1-207ENST00000628646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■■■□ 24.9
SYNGAP1-207ENST00000628646 OPLAHO14841 1288 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 TMEM62Q0P6H9 643 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 MCPH1Q8NEM0 835 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 PSPC1Q8WXF1 523 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 RPA1P27694 616 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 GSDMAQ96QA5 445 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 EXOC7Q9UPT5 735 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 HBP1O60381 514 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 DUSP28Q4G0W2 176 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 RAD54LQ92698 747 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 SLC5A5Q92911 643 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
SYNGAP1-207ENST00000628646 NAALADL2Q58DX5 795 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 DDX12PQ92771 950 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 SENP6Q9GZR1 1112 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 FAM53CQ9NYF3 392 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 N4BP3O15049 544 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 TEX33O43247 280 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 LRRC41Q15345 812 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 ZNF792Q3KQV3 632 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 MAGEF1Q9HAY2 307 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 EML1O00423 815 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 MED24O75448 989 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 OATP04181 439 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 CYP2C9P11712 490 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 CLK2P49760 499 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 LIG4P49917 911 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 MOGSQ13724 837 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 TXLNBQ8N3L3 684 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
SYNGAP1-207ENST00000628646 BICDL2A1A5D9 508 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SEPT4O43236 478 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 FKBP15Q5T1M5 1219 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms