RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ABCB6Q9NP58 842 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 KIF1BO60333 1816 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 LGALS16A8MUM7 142 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 SLC16A4O15374 487 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 LUC7L3O95232 432 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 NR1D1P20393 614 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CA4P22748 312 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CLCN6P51797 869 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 FAM20AQ96MK3 541 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 SLC8A2Q9UPR5 921 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 TNFAIP2Q03169 654 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 CASP8Q14790 479 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 GRM4Q14833 912 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 FGD4Q96M96 766 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 GCNAQ96QF7 691 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 MID2Q9UJV3 735 aa13.74□□□□□ -0.21
SCN8A-209ENST00000627620 DIS3Q9Y2L1 958 aaKnown RBP13.74□□□□□ -0.21
SCN8A-209ENST00000627620 MROH7-TTC4A0A0A0MT08 1334 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 GSTA4O15217 222 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 COASYQ13057 564 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 C6orf118Q5T5N4 469 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 LMCD1Q9NZU5 365 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 CCDC188H7C350 402 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 IPO5O00410 1097 aaKnown RBP13.73□□□□□ -0.21
SCN8A-209ENST00000627620 CIITAP33076 1130 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 KRT76Q01546 638 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 TOPORSQ9NS56 1045 aaPredicted RBP13.73□□□□□ -0.21
SCN8A-209ENST00000627620 NCF2P19878 526 aaPredicted RBP13.73□□□□□ -0.21
SCN8A-209ENST00000627620 MX2P20592 715 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 PRCPP42785 496 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 PHKA2P46019 1235 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 PASD1Q8IV76 773 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 POLD4Q9HCU8 107 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 PVALEFA0A1B0GWK0 134 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 POTECB2RU33 542 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
SCN8A-209ENST00000627620 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 KLC2Q9H0B6 622 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 ABHD10Q9NUJ1 306 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 CPDO75976 1380 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 KDM6BO15054 1643 aa13.73□□□□□ -0.21
SCN8A-209ENST00000627620 GCKP35557 465 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ADCY2Q08462 1091 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF568Q3ZCX4 644 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 TRIM67Q6ZTA4 783 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 GOLPH3LQ9H4A5 285 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 PODXLO00592 558 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 GNAT1P11488 350 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 STMN1P16949 149 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 RCAN1P53805 252 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 SH3BGRP55822 239 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 KCNH2Q12809 1159 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 KLC3Q6P597 504 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 SARM1Q6SZW1 724 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 RBM41Q96IZ5 413 aaKnown RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 SAYSD1Q9NPB0 183 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ZNF302Q9NR11 478 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 GPC5P78333 572 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 C2orf69Q8N8R5 385 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 MTRQ99707 1265 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 EFHD1Q9BUP0 239 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 INPP5FQ9Y2H2 1132 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 DENND3A2RUS2 1198 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 CYP19A1P11511 503 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 CDC27P30260 824 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ART3Q13508 389 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ATG16L1Q676U5 607 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-209ENST00000627620 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ORC6Q9Y5N6 252 aa13.72□□□□□ -0.21
SCN8A-209ENST00000627620 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 ZRANB2O95218 330 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 PHEXP78562 749 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 MAML1Q92585 1016 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms