RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 RTP1P59025 263 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 SNRPFP62306 86 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 GTF2BQ00403 316 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 PPP2R3AQ06190 1150 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 KCNA1Q09470 495 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 SLC9A9Q8IVB4 645 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 SEPT1Q8WYJ6 367 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 NIFKQ9BYG3 293 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 METTL14Q9HCE5 456 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 A0A1W2PQJ5 194 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 RNF225M0QZC1 329 aaPredicted RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 SLC16A3O15427 465 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 KIFAP3Q92845 792 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 KCNN1Q92952 543 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 PARK7Q99497 189 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 EDEM3Q9BZQ6 932 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
CCDC163-201ENST00000625766 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
CCDC163-201ENST00000625766 TTC26A0AVF1 554 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 PES1O00541 588 aaKnown RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 CCP110O43303 1012 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 NR3C1P04150 777 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 NCKAP1LP55160 1127 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 HUNKP57058 714 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 SYCP1Q15431 976 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 CELF3Q5SZQ8 465 aaKnown RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 MCPH1Q8NEM0 835 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 OR8K1Q8NGG5 319 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 MKNK1Q9BUB5 465 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
CCDC163-201ENST00000625766 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 LUC7L2Q9Y383 392 aaKnown RBP12.91□□□□□ -0.34
CCDC163-201ENST00000625766 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 KRT9P35527 623 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
CCDC163-201ENST00000625766 PRKCEQ02156 737 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
CCDC163-201ENST00000625766 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 TMTC1Q8IUR5 882 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 PCYT2Q99447 389 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 DNAJC7Q99615 494 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MLXIPQ9HAP2 919 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 NRBP2Q9NSY0 501 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 ABHD10Q9NUJ1 306 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC163-201ENST00000625766 ZMYM2Q9UBW7 1377 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
CCDC163-201ENST00000625766 AKAP3O75969 853 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 GGPS1O95749 300 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 TUBB4AP04350 444 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 SMTNP53814 917 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 LY6KQ17RY6 165 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 CEP89Q96ST8 783 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
CCDC163-201ENST00000625766 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
CCDC163-201ENST00000625766 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
CCDC163-201ENST00000625766 LGR5O75473 907 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 ARIH2O95376 493 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 OATP04181 439 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 SCP2P22307 547 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 ADORA2AP29274 412 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 ABCD1P33897 745 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
CCDC163-201ENST00000625766 STAT5BP51692 787 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 INHBEP58166 350 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 ZBED6P86452 979 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 SP4Q02446 784 aa12.89□□□□□ -0.35
CCDC163-201ENST00000625766 KCNMA1Q12791 1236 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms