RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 SYCE2Q6PIF2 218 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
DDX41-218ENST00000625286 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 MICAL1Q8TDZ2 1067 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
DDX41-218ENST00000625286 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 PHF7Q9BWX1 381 aaPredicted RBP12.57□□□□□ -0.4
DDX41-218ENST00000625286 ADAMTS10Q9H324 1103 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 TLR9Q9NR96 1032 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 KMT2EQ8IZD2 1858 aa12.57□□□□□ -0.4
DDX41-218ENST00000625286 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
DDX41-218ENST00000625286 ZBTB43O43298 467 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 CPA1P15085 419 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
DDX41-218ENST00000625286 UBE3AQ05086 875 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 TMEM184AQ6ZMB5 413 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
DDX41-218ENST00000625286 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 PBXIP1Q96AQ6 731 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 LENG9Q96B70 501 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 ZNF668Q96K58 619 aaPredicted RBP12.56□□□□□ -0.4
DDX41-218ENST00000625286 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
DDX41-218ENST00000625286 PCDHB12Q9Y5F1 795 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 COL1A2P08123 1366 aa12.56□□□□□ -0.4
DDX41-218ENST00000625286 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 GPR182O15218 404 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 ZNF862O60290 1169 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 ZNF76P36508 570 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 CLCN3P51790 818 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 VCPP55072 806 aaKnown RBP12.55□□□□□ -0.4
DDX41-218ENST00000625286 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
DDX41-218ENST00000625286 SPOUT1Q5T280 376 aaKnown RBP12.55□□□□□ -0.4
DDX41-218ENST00000625286 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 SYNE3Q6ZMZ3 975 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 TEX2Q8IWB9 1127 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 THNSL1Q8IYQ7 743 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 PPP2R3CQ969Q6 453 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 TMEM161AQ9NX61 479 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
DDX41-218ENST00000625286 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 PDGFBP01127 241 aaPredicted RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 FGFR4P22455 802 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 NLRP11P59045 1033 aaKnown RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 RASGRP4Q8TDF6 673 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 GJA10Q969M2 543 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 ZMYND12Q9H0C1 365 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 ELAC1Q9H777 363 aaKnown RBP12.54□□□□□ -0.4
DDX41-218ENST00000625286 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
DDX41-218ENST00000625286 hCG_1984214I3L0E3 225 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 CSDE1O75534 798 aaKnown RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 SP100P23497 879 aaPredicted RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 TECP42680 631 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 UGCGQ16739 394 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 KANK3Q6NY19 840 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 LLGL2Q6P1M3 1020 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 LRRC71Q8N4P6 559 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 ZNF713Q8N859 430 aaPredicted RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
DDX41-218ENST00000625286 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 TMEM117Q9H0C3 514 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 LZTS1Q9Y250 596 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 PCDHA10Q9Y5I2 948 aa12.53□□□□□ -0.4
DDX41-218ENST00000625286 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 STBD1O95210 358 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 LAG3P18627 525 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 CIITAP33076 1130 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms