RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 RPGRIP1Q96KN7 1286 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 APOL5Q9BWW9 433 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 KCNH6Q9H252 994 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 RGS18Q9NS28 235 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 CDH22Q9UJ99 828 aa12.46□□□□□ -0.41
LINC00963-214ENST00000622680 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-214ENST00000622680 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-214ENST00000622680 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 SLC26A2P50443 739 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 CLCN3P51790 818 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 ZXDAP98168 799 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-214ENST00000622680 DUSP6Q16828 381 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 SLC24A5Q71RS6 500 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 PBXIP1Q96AQ6 731 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 ZNF668Q96K58 619 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-214ENST00000622680 CWH43Q9H720 699 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
LINC00963-214ENST00000622680 MIA3Q5JRA6 1907 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
LINC00963-214ENST00000622680 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
LINC00963-214ENST00000622680 FSCN2O14926 492 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 UBE3AQ05086 875 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 ZNF484Q5JVG2 852 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 MIS18BP1Q6P0N0 1132 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 NIPA1Q7RTP0 329 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-214ENST00000622680 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 SUSD6Q92537 303 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 NEK1Q96PY6 1258 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-214ENST00000622680 AAASQ9NRG9 546 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
LINC00963-214ENST00000622680 RNF19AQ9NV58 838 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
LINC00963-214ENST00000622680 HIDE1A8MVS5 230 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 GPR182O15218 404 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 GPR32O75388 356 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 CPA1P15085 419 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 LAG3P18627 525 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 TECP42680 631 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-214ENST00000622680 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
LINC00963-214ENST00000622680 EXOSC10Q01780 885 aaKnown RBP12.43□□□□□ -0.42
LINC00963-214ENST00000622680 DSC3Q14574 896 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 LRRC55Q6ZSA7 311 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 BMP8AQ7Z5Y6 402 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 SUGP1Q8IWZ8 645 aaKnown RBP12.43□□□□□ -0.42
LINC00963-214ENST00000622680 LRRC71Q8N4P6 559 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 RASGRP4Q8TDF6 673 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 TCF25Q9BQ70 676 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 ZNF577Q9BSK1 485 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 ATP6V0A4Q9HBG4 840 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 ENTPD7Q9NQZ7 604 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 FRYLO94915 3013 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
LINC00963-214ENST00000622680 DMXL1Q9Y485 3027 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 NLRP11P59045 1033 aaKnown RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 TCF15Q12870 199 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 KCNC3Q14003 757 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 PFKFB3Q16875 520 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 ANKRD54Q6NXT1 300 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 SYCE2Q6PIF2 218 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 BBXQ8WY36 941 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 MRPS27Q92552 414 aaKnown RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 GABBR1Q9UBS5 961 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 TCEAL9Q9UHQ7 104 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 MAFBQ9Y5Q3 323 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-214ENST00000622680 DCHS1Q96JQ0 3298 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 ZNF292O60281 2723 aa12.42□□□□□ -0.42
LINC00963-214ENST00000622680 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-214ENST00000622680 CYP3A4P08684 503 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 FGFR4P22455 802 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 ADD1P35611 737 aaKnown RBP12.41□□□□□ -0.42
LINC00963-214ENST00000622680 PTPN5P54829 565 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 SETQ01105 290 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-214ENST00000622680 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 UGCGQ16739 394 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 PRR16Q569H4 304 aa12.41□□□□□ -0.42
LINC00963-214ENST00000622680 CLLU1OSQ5K130 101 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms