RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.31
TP53-227ENST00000622645 TBC1D12O60347 775 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 RNF40O75150 1001 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 GGCXP38435 758 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
TP53-227ENST00000622645 ZNF131P52739 623 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 JAM2P57087 298 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 IL31RAQ8NI17 732 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 PSMD1Q99460 953 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 MXRA8Q9BRK3 442 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 ZNF536O15090 1300 aa13.08□□□□□ -0.32
TP53-227ENST00000622645 FAM170AA1A519 330 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 AGPSO00116 658 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 GFPT2O94808 682 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 PRKCIP41743 596 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 PTGER2P43116 358 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 CPXCR1Q8N123 301 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 KCNH7Q9NS40 1196 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 ATAD5Q96QE3 1844 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 ZSCAN5CA6NGD5 496 aaPredicted RBP13.07□□□□□ -0.32
TP53-227ENST00000622645 WNT10BO00744 389 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 PLA2G6O60733 806 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 HIP1RO75146 1068 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 TRIM49P0CI25 452 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 TRIM49CP0CI26 452 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 DPEP1P16444 411 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 KCNA3P22001 575 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
TP53-227ENST00000622645 CBWD6Q4V339 395 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 CBWD3Q5JTY5 395 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 CBWD5Q5RIA9 395 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
TP53-227ENST00000622645 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 DAW1Q8N136 415 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 FBXL5Q9UKA1 691 aa13.07□□□□□ -0.32
TP53-227ENST00000622645 GTPBP10A4D1E9 387 aaKnown RBP13.06□□□□□ -0.32
TP53-227ENST00000622645 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
TP53-227ENST00000622645 ICAM1P05362 532 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 GLI1P08151 1106 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 ASNSP08243 561 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 FMO5P49326 533 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 HSD17B4P51659 736 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 INPP4AQ96PE3 977 aaPredicted RBP13.06□□□□□ -0.32
TP53-227ENST00000622645 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■■ 27.3
TP53-227ENST00000622645 FLOT1O75955 427 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 CAPN2P17655 700 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 CXCL9Q07325 125 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 MAPK7Q13164 816 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 C10orf76Q5T2E6 689 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 RIT2Q99578 217 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 DMAC2Q9NW81 257 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 FRMD4BQ9Y2L6 1034 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 TISP43B9A030 160 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 KCNK3O14649 394 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 EVI5O60447 810 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 KRT12Q99456 494 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
TP53-227ENST00000622645 GOLGA6BA6NDN3 693 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 BTNL10A8MVZ5 291 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 ALAS1P13196 640 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 MUTP22033 750 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 GUCY2CP25092 1073 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 RPS6KA1Q15418 735 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 NFIL3Q16649 462 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 MKNK1Q9BUB5 465 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 KCND2Q9NZV8 630 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 ZHX2Q9Y6X8 837 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 F8VZ95 297 aa13.05□□□□□ -0.32
TP53-227ENST00000622645 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
TP53-227ENST00000622645 EXOC3O60645 756 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms