RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ECM2O94769 699 aaPredicted RBP17.14■□□□□ 0.33
NPHP4-211ENST00000622020 PLCG2P16885 1265 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 UBXN2AP68543 259 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 SEPT2Q15019 361 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 CCDC38Q502W7 563 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 MAEAQ7L5Y9 396 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 CACNA2D3Q8IZS8 1091 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 FMO2Q99518 471 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 SIX2Q9NPC8 291 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
NPHP4-211ENST00000622020 F8VZ95 297 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
NPHP4-211ENST00000622020 DCAF12L1Q5VU92 463 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 C6orf89Q6UWU4 347 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
NPHP4-211ENST00000622020 FAM86B1E9PN63 330 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 FAM86B2P0C5J1 330 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 STAT1P42224 750 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 NFIAQ12857 509 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
NPHP4-211ENST00000622020 THAP2Q9H0W7 228 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 PCDHAC2Q9Y5I4 1007 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 ARHGAP4P98171 946 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 DRAP1Q14919 205 aaPredicted RBP17.13■□□□□ 0.33
NPHP4-211ENST00000622020 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
NPHP4-211ENST00000622020 LRIG3Q6UXM1 1119 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 PSMD1Q99460 953 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 CXorf56Q9H5V9 222 aa17.13■□□□□ 0.33
NPHP4-211ENST00000622020 ASTN1O14525 1302 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 IFI35P80217 286 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 TBC1D10BQ4KMP7 808 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 KIRREL3Q8IZU9 778 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 MYCT1Q8N699 235 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 C18orf8Q96DM3 657 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 TBC1D31Q96DN5 1066 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 DR1Q01658 176 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 CCDC25Q86WR0 208 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 FBXO25Q8TCJ0 367 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
NPHP4-211ENST00000622020 BZW2Q9Y6E2 419 aaKnown RBP17.12■□□□□ 0.33
NPHP4-211ENST00000622020 FRMD3A2A2Y4 597 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CHN1P15882 459 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 ZNF76P36508 570 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
NPHP4-211ENST00000622020 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 FOXO6A8MYZ6 492 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 EML1O00423 815 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 SHMT1P34896 483 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 SMTNP53814 917 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 BIRC3Q13489 604 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CBWD6Q4V339 395 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CBWD3Q5JTY5 395 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CBWD5Q5RIA9 395 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CYB5D1Q6P9G0 228 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 MGARPQ8TDB4 240 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 ALG3Q92685 438 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 LAMB2P55268 1798 aa17.11■□□□□ 0.33
NPHP4-211ENST00000622020 CCDC188H7C350 402 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 RASSF9O75901 435 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 FGFR4P22455 802 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SCTRP47872 440 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 STXBP5LQ9Y2K9 1186 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 MEIS2O14770 477 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 GABPAQ06546 454 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
NPHP4-211ENST00000622020 HYIQ5T013 277 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 C10orf76Q5T2E6 689 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
NPHP4-211ENST00000622020 TAX1BP1Q86VP1 789 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms