RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 MAST2Q6P0Q8 1798 aa13.72□□□□□ -0.21
SCAMP1-207ENST00000621999 AKR1A1P14550 325 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 ZNF75DP51815 510 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 SOX10P56693 466 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 RNF180Q86T96 592 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 APBA2Q99767 749 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 TUBGCP2Q9BSJ2 902 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 RWDD2AQ9UIY3 292 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 LRRC37AA6NMS7 1700 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 PPP2R5CQ13362 524 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 ENOX1Q8TC92 643 aaKnown RBP13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.21
SCAMP1-207ENST00000621999 KBTBD13C9JR72 458 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 OPLAHO14841 1288 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 PGK1P00558 417 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 ODF2Q5BJF6 829 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 CCDC60Q8IWA6 550 aaPredicted RBP13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 KIFC3Q9BVG8 833 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 NLRC4Q9NPP4 1024 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 GNA14O95837 355 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 ARHGAP29Q52LW3 1261 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 IQSEC1Q6DN90 963 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 C4orf32Q8N8J7 132 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.22
SCAMP1-207ENST00000621999 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 CYP2C9P11712 490 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 PHKA2P46019 1235 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 CLCN3P51790 818 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 SESTD1Q86VW0 696 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 SEL1LQ9UBV2 794 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 DOCK2Q92608 1830 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 A0A1B0GUL6 1792 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 PSMC2P35998 433 aaKnown RBP13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 MAP2K1Q02750 393 aaPredicted RBP13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 KNOP1Q1ED39 458 aaKnown RBP13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
SCAMP1-207ENST00000621999 FAM170AA1A519 330 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 IKBKBO14920 756 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 CLDN3O15551 220 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 HSDL1Q3SXM5 330 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 C4orf19Q8IY42 314 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 MSTO1Q9BUK6 570 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 MYH8P13535 1937 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 TFRCP02786 760 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 KLRC1P26715 233 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 KCNB1Q14721 858 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 CCL14Q16627 93 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 PTPN18Q99952 460 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 ODF2LQ9ULJ1 636 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 SLC45A1Q9Y2W3 748 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 MYBP10242 640 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 INSRRP14616 1297 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 YARSP54577 528 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 PRKCZQ05513 592 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 ARHGAP44Q17R89 818 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 GUF1Q8N442 669 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 HMX1Q9NP08 348 aaPredicted RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 KIF3CO14782 793 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 SKILP12757 684 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 KRT5P13647 590 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 RARRES1P49788 294 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 ZIC5Q96T25 663 aa13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
SCAMP1-207ENST00000621999 IGLV3-22A0A075B6J6 115 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 M0R2N6 131 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 RHOBTB3O94955 611 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 COPB1P53618 953 aaKnown RBP13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 LRRC63Q05C16 580 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
SCAMP1-207ENST00000621999 MAGEB2O15479 319 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms