RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 INTS7Q9NVH2 962 aaKnown RBP6.51□□□□□ -1.37
BRCA1-229ENST00000621897 H2AFY2Q9P0M6 372 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-229ENST00000621897 MAGEL2Q9UJ55 1249 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 NR2E1Q9Y466 385 aa6.51□□□□□ -1.37
BRCA1-229ENST00000621897 KPNA6O60684 536 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 RANGAP1P46060 587 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 SLC6A3Q01959 620 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 NFYCQ13952 458 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 R3HDM1Q15032 1099 aaKnown RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 ESRP1Q6NXG1 681 aaKnown RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 PALM2Q8IXS6 379 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 RTKN2Q8IZC4 609 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 GIMAP8Q8ND71 665 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 NINJ1Q92982 152 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 ELF4Q99607 663 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 DEF6Q9H4E7 631 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 ZFR2Q9UPR6 939 aaKnown RBP6.5□□□□□ -1.37
BRCA1-229ENST00000621897 MYRFQ9Y2G1 1151 aa6.5□□□□□ -1.37
BRCA1-229ENST00000621897 UBA6A0AVT1 1052 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-229ENST00000621897 ZNF891A8MT65 544 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-229ENST00000621897 C1QTNF3-AMACRE9PGA6 284 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 MAFO75444 373 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-229ENST00000621897 ATP2A2P16615 1042 aaKnown RBP6.49□□□□□ -1.37
BRCA1-229ENST00000621897 CR2P20023 1033 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 DUSP8Q13202 625 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 ZNF174Q15697 407 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 USP30Q70CQ3 517 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 DHX37Q8IY37 1157 aaKnown RBP6.49□□□□□ -1.37
BRCA1-229ENST00000621897 FUKQ8N0W3 1084 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 NXPE1Q8N323 547 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 OR14K1Q8NGZ2 314 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 MAML3Q96JK9 1138 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 ORAI3Q9BRQ5 295 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 OR10A2Q9H208 303 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 OXSMQ9NWU1 459 aa6.49□□□□□ -1.37
BRCA1-229ENST00000621897 MATN3O15232 486 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 CDC14BO60729 498 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 CDC45O75419 566 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 SELENOPP49908 381 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 MEOX1P50221 254 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 ANTXR2P58335 489 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 HGFACQ04756 655 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-229ENST00000621897 SLFN12LQ6IEE8 588 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 CNNM4Q6P4Q7 775 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 BORCS6Q96GS4 357 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 PLA2G12BQ9BX93 195 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 C12orf65Q9H3J6 166 aaKnown RBP6.48□□□□□ -1.37
BRCA1-229ENST00000621897 TSC22D4Q9Y3Q8 395 aa6.48□□□□□ -1.37
BRCA1-229ENST00000621897 CYP17A1P05093 508 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 TNFRSF1AP19438 455 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 POU3F2P20265 443 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-229ENST00000621897 NEK4P51957 841 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 DSG1Q02413 1049 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 ROM1Q03395 351 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 ADAM15Q13444 863 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 MYBPC3Q14896 1274 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 EPHA7Q15375 998 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 DALRD3Q5D0E6 543 aaKnown RBP6.47□□□□□ -1.37
BRCA1-229ENST00000621897 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 NIM1KQ8IY84 436 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 OR5AN1Q8NGI8 311 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 E2F7Q96AV8 911 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 FAM184BQ9ULE4 1060 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 TCAF1Q9Y4C2 921 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 SPO11Q9Y5K1 396 aa6.47□□□□□ -1.37
BRCA1-229ENST00000621897 F2P00734 622 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 MAP3K12Q12852 859 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 ACAP1Q15027 740 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 SEPT7Q16181 437 aaKnown RBP6.46□□□□□ -1.38
BRCA1-229ENST00000621897 PRAMEF9Q5VWM5 478 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 SH3RF3Q8TEJ3 882 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-229ENST00000621897 CHTF18Q8WVB6 975 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 OR14A2Q96R54 314 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 TUBGCP5Q96RT8 1024 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 FEZ1Q99689 392 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 TARS2Q9BW92 718 aaKnown RBP6.46□□□□□ -1.38
BRCA1-229ENST00000621897 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 PUF60Q9UHX1 559 aaKnown RBP6.46□□□□□ -1.38
BRCA1-229ENST00000621897 ZKSCAN5Q9Y2L8 839 aa6.46□□□□□ -1.38
BRCA1-229ENST00000621897 CTDP1Q9Y5B0 961 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-229ENST00000621897 MUSKO15146 869 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 RAD17O75943 681 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 STAT3P40763 770 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 SPDYAQ5MJ70 313 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 Q6ZSN1 163 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 KIAA0907Q7Z7F0 614 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-229ENST00000621897 GPR135Q8IZ08 494 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 RTF1Q92541 710 aaKnown RBP6.45□□□□□ -1.38
BRCA1-229ENST00000621897 AGO3Q9H9G7 860 aaKnown RBP6.45□□□□□ -1.38
BRCA1-229ENST00000621897 TOMM22Q9NS69 142 aa6.45□□□□□ -1.38
BRCA1-229ENST00000621897 THG1LQ9NWX6 298 aaKnown RBP6.45□□□□□ -1.38
BRCA1-229ENST00000621897 TGM5O43548 720 aa6.44□□□□□ -1.38
BRCA1-229ENST00000621897 SAFB2Q14151 953 aaKnown RBP eCLIP6.44□□□□□ -1.38
BRCA1-229ENST00000621897 KIF18BQ86Y91 864 aa6.44□□□□□ -1.38
BRCA1-229ENST00000621897 NKD2Q969F2 451 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-229ENST00000621897 ADOQ96SZ5 270 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms