RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 MMP1P03956 469 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 CRYBB1P53674 252 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 PPP2R5CQ13362 524 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 XKR3Q5GH77 459 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 TBC1D32Q96NH3 1257 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 NIFKQ9BYG3 293 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 BRMS1Q9HCU9 246 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 LMCD1Q9NZU5 365 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 THEGQ9P2T0 379 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 ST3GAL5Q9UNP4 418 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 MYO7AQ13402 2215 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 BRWD1Q9NSI6 2320 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 DGKIO75912 1065 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 CCDC83Q8IWF9 413 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 TMEM192Q8IY95 271 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 DIS3L2Q8IYB7 885 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 FIBCD1Q8N539 461 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 ATXN2LQ8WWM7 1075 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 ZNF689Q96CS4 500 aaPredicted RBP20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 SAMD11Q96NU1 681 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 SH2D3AQ9BRG2 576 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 ADAMTS10Q9H324 1103 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 SEPT9Q9UHD8 586 aaPredicted RBP20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 AKT3Q9Y243 479 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 TTC28Q96AY4 2481 aa20.19■□□□□ 0.82
SCAMP4-213ENST00000621748 RALGAPA2Q2PPJ7 1873 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 TBX3O15119 743 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 TMOD1P28289 359 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 NLRP11P59045 1033 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 SKIV2LQ15477 1246 aaKnown RBP20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 MTERF2Q49AM1 385 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 FAM228AQ86W67 206 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 ZNF668Q96K58 619 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 ADGRA3Q8IWK6 1321 aa20.18■□□□□ 0.82
SCAMP4-213ENST00000621748 DDX11L8A8MPP1 907 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 WNT7AO00755 349 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 GPR182O15218 404 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 ST18O60284 1047 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 PSMC5P62195 406 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 GUCY1B3Q02153 619 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 DRP2Q13474 957 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 TRIM29Q14134 588 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 RABEP1Q15276 862 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 TJAP1Q5JTD0 557 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 ANO5Q75V66 913 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 NPAS4Q8IUM7 802 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 ASB2Q96Q27 587 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 ADAM2Q99965 735 aa20.17■□□□□ 0.82
SCAMP4-213ENST00000621748 H3BNC9 293 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 MARCH6O60337 910 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 QARSP47897 775 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 MRPS5P82675 430 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 TFF2Q03403 129 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 GPM6BQ13491 265 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 BTG3Q14201 252 aaPredicted RBP20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 ODR4Q5SWX8 454 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 RGS18Q9NS28 235 aa20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 WRAP73Q9P2S5 460 aaPredicted RBP20.16■□□□□ 0.82
SCAMP4-213ENST00000621748 IGKV6-21A0A0C4DH24 114 aa20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 STAG3L1P0CL83 205 aa20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 IBSPP21815 317 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 SARSP49591 514 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 GPC3P51654 580 aa20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 PLA2G4FQ68DD2 849 aa20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 FAM43BQ6ZT52 329 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 SLFN12Q8IYM2 578 aa20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 CLP1Q92989 425 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 TCF20Q9UGU0 1960 aaKnown RBP20.15■□□□□ 0.82
SCAMP4-213ENST00000621748 DENND3A2RUS2 1198 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 C9IYK1 514 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 C5orf67F2Z3F1 127 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 P4HBP07237 508 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 CTNNB1P35222 781 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 BMPR1AP36894 532 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 GATMP50440 423 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 DSC3Q14574 896 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 EPHA7Q15375 998 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 NCAPH2Q6IBW4 605 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 SLC24A5Q71RS6 500 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 ZNF710Q8N1W2 664 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 MRPL38Q96DV4 380 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 RGL1Q9NZL6 768 aa20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 MRPL42Q9Y6G3 142 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-213ENST00000621748 MAFO75444 373 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 NPEPPSP55786 919 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 CALCRLQ16602 461 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms