RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PIGOQ8TEQ8 1089 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 SLC7A3Q8WY07 619 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 CXXC1Q9P0U4 656 aaPredicted RBP20.42■□□□□ 0.86
LITAF-220ENST00000620789 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
LITAF-220ENST00000620789 MYH15Q9Y2K3 1946 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 PP2D1A8MPX8 630 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 BAIAP3O94812 1187 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 F13A1P00488 732 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 VTNP04004 478 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 POLGP54098 1239 aaPredicted RBP20.41■□□□□ 0.86
LITAF-220ENST00000620789 MKRN4PQ13434 485 aaPredicted RBP20.41■□□□□ 0.86
LITAF-220ENST00000620789 LPIN1Q14693 890 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 PTPAQ15257 358 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 TCTN1Q2MV58 587 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
LITAF-220ENST00000620789 KRT79Q5XKE5 535 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 DBF4BQ8NFT6 615 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
LITAF-220ENST00000620789 NACC1Q96RE7 527 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 DHX33Q9H6R0 707 aaKnown RBP20.41■□□□□ 0.86
LITAF-220ENST00000620789 SQORQ9Y6N5 450 aa20.41■□□□□ 0.86
LITAF-220ENST00000620789 ZBBXA8MT70 800 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 RBAK-RBAKDNI3L0D1 243 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 CDC25AP30304 524 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 RARRES1P49788 294 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 DNM2P50570 870 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 DRP2Q13474 957 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 KIZQ2M2Z5 673 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 ZNF710Q8N1W2 664 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 USP38Q8NB14 1042 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 SEPT8Q92599 483 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 CCDC43Q96MW1 224 aaKnown RBP20.4■□□□□ 0.86
LITAF-220ENST00000620789 USP28Q96RU2 1077 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 IFIH1Q9BYX4 1025 aaKnown RBP20.4■□□□□ 0.86
LITAF-220ENST00000620789 DBR1Q9UK59 544 aaKnown RBP20.4■□□□□ 0.86
LITAF-220ENST00000620789 GINS2Q9Y248 185 aa20.4■□□□□ 0.86
LITAF-220ENST00000620789 A0A087WWV3 80 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 GPR32O75388 356 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 CEBPZQ03701 1054 aaKnown RBP20.39■□□□□ 0.85
LITAF-220ENST00000620789 IKBKEQ14164 716 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 EMC2Q15006 297 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 ECM1Q16610 540 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 APBB2Q92870 758 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 AK8Q96MA6 479 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 PPP1R16BQ96T49 567 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 MMTAG2Q9BU76 263 aaKnown RBP20.39■□□□□ 0.85
LITAF-220ENST00000620789 CDHR5Q9HBB8 845 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 SLC4A7Q9Y6M7 1214 aa20.39■□□□□ 0.85
LITAF-220ENST00000620789 ABHD14A-ACY1A0A1B0GW23 586 aa20.38■□□□□ 0.85
LITAF-220ENST00000620789 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 GAS2O43903 313 aaKnown RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 EFCAB14O75071 495 aa20.38■□□□□ 0.85
LITAF-220ENST00000620789 CRYBB1P53674 252 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 NLRP11P59045 1033 aaKnown RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 ZNF396Q96N95 335 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 BMP2KQ9NSY1 1161 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 SUCLA2Q9P2R7 463 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
LITAF-220ENST00000620789 MORC2Q9Y6X9 1032 aaPredicted RBP20.38■□□□□ 0.85
LITAF-220ENST00000620789 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 DGAT1O75907 488 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 BRD1O95696 1058 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 MARCKSP29966 332 aaPredicted RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 CD52P31358 61 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 LONP1P36776 959 aaKnown RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 NASPP49321 788 aaPredicted RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 GPC3P51654 580 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 WDR5P61964 334 aaKnown RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 CDC42EP1Q00587 391 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 GRIN1Q05586 938 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 SLC39A14Q15043 492 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 TMEM40Q8WWA1 233 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 OSMRQ99650 979 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 MTRQ99707 1265 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 ADAMTS10Q9H324 1103 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 AGO3Q9H9G7 860 aaKnown RBP20.37■□□□□ 0.85
LITAF-220ENST00000620789 ATP6V0A4Q9HBG4 840 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 XPNPEP1Q9NQW7 623 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 LOXHD1Q8IVV2 1947 aa20.37■□□□□ 0.85
LITAF-220ENST00000620789 KCNJ6P48051 423 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 FXR1P51114 621 aaKnown RBP eCLIP20.36■□□□□ 0.85
LITAF-220ENST00000620789 SMAD3P84022 425 aaKnown RBP20.36■□□□□ 0.85
LITAF-220ENST00000620789 PAK2Q13177 524 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 HYIQ5T013 277 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 FAM109BQ6ICB4 259 aaPredicted RBP20.36■□□□□ 0.85
LITAF-220ENST00000620789 TCP11Q8WWU5 503 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 TMEM143Q96AN5 459 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 FBXO2Q9UK22 296 aaPredicted RBP20.36■□□□□ 0.85
LITAF-220ENST00000620789 PADI3Q9ULW8 664 aa20.36■□□□□ 0.85
LITAF-220ENST00000620789 SRPRBQ9Y5M8 271 aaKnown RBP20.36■□□□□ 0.85
LITAF-220ENST00000620789 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 USO1O60763 962 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 RPS6KA5O75582 802 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 ATP2A2P16615 1042 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 CABP7Q86V35 215 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 RHPN2Q8IUC4 686 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 KCTD17Q8N5Z5 321 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms