RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 HERVK_113Q902F9 699 aa12.07□□□□□ -0.48
TARDBP-223ENST00000620632 ZNF668Q96K58 619 aaPredicted RBP12.07□□□□□ -0.48
TARDBP-223ENST00000620632 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
TARDBP-223ENST00000620632 DHX33Q9H6R0 707 aaKnown RBP12.07□□□□□ -0.48
TARDBP-223ENST00000620632 SUGCTQ9HAC7 445 aa12.07□□□□□ -0.48
TARDBP-223ENST00000620632 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
TARDBP-223ENST00000620632 TRPV2Q9Y5S1 764 aa12.07□□□□□ -0.48
TARDBP-223ENST00000620632 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 FGBP02675 491 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 PFKMP08237 780 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 DDIT3P35638 169 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 LPIN1Q14693 890 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 PLEKHG4Q58EX7 1191 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 XKR9Q5GH70 373 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 PSRC1Q6PGN9 363 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 RSPH3Q86UC2 560 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 DBF4BQ8NFT6 615 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 RNPC3Q96LT9 517 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 CELF4Q9BZC1 486 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 ANKEF1Q9NU02 776 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 TFIP11Q9UBB9 837 aaKnown RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
TARDBP-223ENST00000620632 KDM3AQ9Y4C1 1321 aa12.06□□□□□ -0.48
TARDBP-223ENST00000620632 CDH23Q9H251 3354 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
TARDBP-223ENST00000620632 BMP15O95972 392 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 GRB10Q13322 594 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 KIZQ2M2Z5 673 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 SPECC1Q5M775 1068 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 IER5Q5VY09 327 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 HAUS3Q68CZ6 603 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 USP49Q70CQ1 688 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 OTUD6AQ7L8S5 288 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 KSR1Q8IVT5 923 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 NME8Q8N427 588 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 LINC00301Q8NCQ3 95 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 ERMNQ8TAM6 284 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 TMEM143Q96AN5 459 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 OSMRQ99650 979 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 ADAMTS10Q9H324 1103 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 DDX19AQ9NUU7 478 aaKnown RBP12.05□□□□□ -0.48
TARDBP-223ENST00000620632 KIAA1024Q9UPX6 916 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 AKT3Q9Y243 479 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
TARDBP-223ENST00000620632 TTC3P53804 2025 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 E9PMD0 336 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 MUTP22033 750 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 CD52P31358 61 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 GPC3P51654 580 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 POLGP54098 1239 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 NLRP11P59045 1033 aaKnown RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 DEFB103AP81534 67 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 DNM1Q05193 864 aaKnown RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 EMC2Q15006 297 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 HYIQ5T013 277 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.488e-12■■■■■ 35.2
TARDBP-223ENST00000620632 TSHZ1Q6ZSZ6 1077 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 TMCO2Q7Z6W1 182 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 LRCH3Q96II8 777 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 PLIN2Q99541 437 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 IFIH1Q9BYX4 1025 aaKnown RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
TARDBP-223ENST00000620632 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 DBR1Q9UK59 544 aaKnown RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 NOC2LQ9Y3T9 749 aaKnown RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-223ENST00000620632 M0QZ92 97 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 USO1O60763 962 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 RPLP2P05387 115 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 TMOD1P28289 359 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 RFC5P40937 340 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 FXR1P51114 621 aaKnown RBP eCLIP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 WDR5P61964 334 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
TARDBP-223ENST00000620632 LRIT3Q3SXY7 679 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 TMEM119Q4V9L6 283 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 KRT79Q5XKE5 535 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 CABP7Q86V35 215 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 FAM228AQ86W67 206 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 SLC7A3Q8WY07 619 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 NACC1Q96RE7 527 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 MAP7D2Q96T17 732 aa12.03□□□□□ -0.48
TARDBP-223ENST00000620632 MTRQ99707 1265 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms