RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 KIAA1671Q9BY89 1806 aa13.46□□□□□ -0.26
UPF3B-204ENST00000619445 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 CDKL5O76039 1030 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ATP4AP20648 1035 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 LENG9Q96B70 501 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ADAM2Q99965 735 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 TEKT3Q9BXF9 490 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 EPHX3Q9H6B9 360 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 VPS54Q9P1Q0 977 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 PCDHA4Q9UN74 947 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 C9IYK1 514 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 OATP04181 439 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 IL9P15248 144 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 XBP1P17861 261 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 CCT2P78371 535 aaKnown RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 HYAL1Q12794 435 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 KIZQ2M2Z5 673 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 Q4G0T1 1027 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ADHFE1Q8IWW8 467 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 KLHL23Q8NBE8 558 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 SPPL3Q8TCT6 385 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 OSMRQ99650 979 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
UPF3B-204ENST00000619445 AKT3Q9Y243 479 aa13.45□□□□□ -0.26
UPF3B-204ENST00000619445 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 MSH4O15457 936 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.268e-7■■■□□ 17.2
UPF3B-204ENST00000619445 GPR32O75388 356 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 ITGB1P05556 798 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 LAG3P18627 525 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 EIF4BP23588 611 aaKnown RBP13.44□□□□□ -0.26
UPF3B-204ENST00000619445 CYP3A7P24462 503 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 PPM1AP35813 382 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 DNM2P50570 870 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 FAM189BP81408 668 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 PRKCEQ02156 737 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 SMAD2Q15796 467 aaKnown RBP13.44□□□□□ -0.26
UPF3B-204ENST00000619445 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
UPF3B-204ENST00000619445 EFCAB12Q6NXP0 572 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 EXOC8Q8IYI6 725 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 EFHBQ8N7U6 833 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 POF1BQ8WVV4 589 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 FAM122AQ96E09 287 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 JPH2Q9BR39 696 aaPredicted RBP13.44□□□□□ -0.26
UPF3B-204ENST00000619445 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 PUF60Q9UHX1 559 aaKnown RBP13.44□□□□□ -0.26
UPF3B-204ENST00000619445 CD207Q9UJ71 328 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
UPF3B-204ENST00000619445 PIEZO1Q92508 2521 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 PRR33A8MZF0 331 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 DCXO43602 365 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 VTNP04004 478 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 NEFLP07196 543 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 SRGAP2BP0DMP2 458 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 LTBRP36941 435 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 PLA2G5P39877 138 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 NDUFV1P49821 464 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 NLRP11P59045 1033 aaKnown RBP13.43□□□□□ -0.26
UPF3B-204ENST00000619445 ZP2Q05996 745 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 ADAM15Q13444 863 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
UPF3B-204ENST00000619445 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 KRT25Q7Z3Z0 450 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 ABI1Q8IZP0 508 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 BLIDQ8IZY5 108 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 TMEM40Q8WWA1 233 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 NAP1L4Q99733 375 aaKnown RBP13.43□□□□□ -0.26
UPF3B-204ENST00000619445 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
UPF3B-204ENST00000619445 TMEM117Q9H0C3 514 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
UPF3B-204ENST00000619445 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
UPF3B-204ENST00000619445 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 MGEA5O60502 916 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 EYA4O95677 639 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
UPF3B-204ENST00000619445 CLCN3P51790 818 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 CAMK1Q14012 370 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 DSC3Q14574 896 aa13.42□□□□□ -0.26
UPF3B-204ENST00000619445 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms