RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CPXCR1Q8N123 301 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 LRRC45Q96CN5 670 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 PPANQ9NQ55 473 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 FBXO28Q9NVF7 368 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 DUSP10Q9Y6W6 482 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 ZHX2Q9Y6X8 837 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 ATP2C2O75185 946 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT18P05783 430 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 CCDC172P0C7W6 258 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 EZRP15311 586 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 ERCC3P19447 782 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 DLK2Q6UY11 383 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 RUFY4Q6ZNE9 571 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 KLHL7Q8IXQ5 586 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 NFU1Q9UMS0 254 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 LOC102724159A0A0B4J2E5 919 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 LAD1O00515 517 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 MEFVO15553 781 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 PPP1R12BO60237 982 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 RHOBTB3O94955 611 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 HNRNPH1P31943 449 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 PWP2Q15269 919 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 METTL3Q86U44 580 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 AENQ8WTP8 325 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 UIMC1Q96RL1 719 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 JPH2Q9BR39 696 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 NUCKS1Q9H1E3 243 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 NDST4Q9H3R1 872 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 SLC39A2Q9NP94 309 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 NLRC4Q9NPP4 1024 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 DMGDHQ9UI17 866 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 MAFBQ9Y5Q3 323 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 KIF13BQ9NQT8 1826 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 RBM47A0AV96 593 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 SPDYE3A6NKU9 549 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PP2D1A8MPX8 630 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PPP1R11O60927 126 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 CPP00450 1065 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 CFBP00751 764 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 OR52Z1P0C646 297 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 MYBL2P10244 700 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 TAL1P17542 331 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PLCG1P19174 1290 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 IFT88Q13099 833 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 MTMR2Q13614 643 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 RAPGEF1Q13905 1077 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 MEA1Q16626 185 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 MAN2A1Q16706 1144 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 SFMBT2Q5VUG0 894 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 CPLX4Q7Z7G2 160 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 VPS36Q86VN1 386 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 SH2D3CQ8N5H7 860 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 DAGLBQ8NCG7 672 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 AK8Q96MA6 479 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PHF12Q96QT6 1004 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT12Q99456 494 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 AS3MTQ9HBK9 375 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 CDK5RAP2Q96SN8 1893 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 ESYT2A0FGR8 921 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 PDE2AO00408 941 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 FLOT1O75955 427 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF76P36508 570 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 TXKP42681 527 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 KLK7P49862 253 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 TRAF1Q13077 416 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 KIAA1755Q5JYT7 1200 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 GIMAP8Q8ND71 665 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 WHAMMQ8TF30 809 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 UBLCP1Q8WVY7 318 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 SCLT1Q96NL6 688 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 SPAG5Q96R06 1193 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 GLT8D2Q9H1C3 349 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 COL2A1P02458 1487 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 HMGB1P1B2RPK0 211 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 NCK2O43639 380 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 DGKZQ13574 1117 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 WDR59Q6PJI9 974 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 CCDC50Q8IVM0 306 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 RIC8AQ9NPQ8 531 aa7.62□□□□□ -1.19
SRGAP3-213ENST00000618999 MYH15Q9Y2K3 1946 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 A0A1W2PQJ5 194 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ADM5C9JUS6 153 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 TRAF5O00463 557 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 SHOX2O60902 331 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT14P02533 472 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PRLRP16471 622 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 HOXA13P31271 388 aaPredicted RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 CTNNA1P35221 906 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ITIH3Q06033 890 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 RPS6KA1Q15418 735 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT79Q5XKE5 535 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 ANKRD40Q6AI12 368 aa7.61□□□□□ -1.19
SRGAP3-213ENST00000618999 PPP1R18Q6NYC8 613 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms