RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MYL3P08590 195 aa15.04■□□□□ -0
CIITA-213ENST00000618327 PPP1R14CQ8TAE6 165 aa15.04■□□□□ -0
CIITA-213ENST00000618327 UBLCP1Q8WVY7 318 aaPredicted RBP15.04■□□□□ -0
CIITA-213ENST00000618327 ASIC3Q9UHC3 531 aa15.04■□□□□ -0
CIITA-213ENST00000618327 CCL15-CCL14A0A0B4J2E2 113 aa15.04■□□□□ -0
CIITA-213ENST00000618327 TLDC2A0PJX2 215 aa15.04■□□□□ -0
CIITA-213ENST00000618327 THAP12O43422 761 aa15.04■□□□□ -0
CIITA-213ENST00000618327 CCL15Q16663 113 aa15.04■□□□□ -0
CIITA-213ENST00000618327 EARS2Q5JPH6 523 aaKnown RBP15.04■□□□□ -0
CIITA-213ENST00000618327 CATSPER3Q86XQ3 398 aa15.04■□□□□ -0
CIITA-213ENST00000618327 KCTD17Q8N5Z5 321 aa15.04■□□□□ -0
CIITA-213ENST00000618327 GPR161Q8N6U8 529 aaKnown RBP15.04■□□□□ -0
CIITA-213ENST00000618327 KIAA1683Q9H0B3 1180 aa15.04■□□□□ -0
CIITA-213ENST00000618327 KCND2Q9NZV8 630 aa15.04■□□□□ -0
CIITA-213ENST00000618327 DNAJC12Q9UKB3 198 aa15.04■□□□□ -0
CIITA-213ENST00000618327 AHDC1Q5TGY3 1603 aaPredicted RBP15.04■□□□□ -0
CIITA-213ENST00000618327 PHKA2P46019 1235 aa15.04■□□□□ -0
CIITA-213ENST00000618327 CATSPER4Q7RTX7 472 aa15.04■□□□□ -0
CIITA-213ENST00000618327 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
CIITA-213ENST00000618327 FAM213AQ9BRX8 229 aa15.04■□□□□ -0
CIITA-213ENST00000618327 TIPINQ9BVW5 301 aa15.04■□□□□ -0
CIITA-213ENST00000618327 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
CIITA-213ENST00000618327 A0A1W2PQC6 194 aa15.03■□□□□ -0
CIITA-213ENST00000618327 EFCAB8A8MWE9 144 aa15.03■□□□□ -0
CIITA-213ENST00000618327 DGAT1O75907 488 aa15.03■□□□□ -0
CIITA-213ENST00000618327 CETPP11597 493 aa15.03■□□□□ -0
CIITA-213ENST00000618327 EVX2Q03828 476 aa15.03■□□□□ -0
CIITA-213ENST00000618327 TAF1CQ15572 869 aaPredicted RBP15.03■□□□□ -0
CIITA-213ENST00000618327 RHPN2Q8IUC4 686 aa15.03■□□□□ -0
CIITA-213ENST00000618327 GTF3C2Q8WUA4 911 aaPredicted RBP15.03■□□□□ -0
CIITA-213ENST00000618327 STMN4Q9H169 189 aaPredicted RBP15.03■□□□□ -0
CIITA-213ENST00000618327 PCDHA13Q9Y5I0 950 aa15.03■□□□□ -0
CIITA-213ENST00000618327 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
CIITA-213ENST00000618327 RGPD5Q99666 1765 aa15.03■□□□□ -0
CIITA-213ENST00000618327 DAPK3O43293 454 aa15.03■□□□□ -0
CIITA-213ENST00000618327 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
CIITA-213ENST00000618327 TTC26A0AVF1 554 aa15.03■□□□□ -0
CIITA-213ENST00000618327 MYO1FO00160 1098 aa15.03■□□□□ -0
CIITA-213ENST00000618327 KRIT1O00522 736 aa15.03■□□□□ -0
CIITA-213ENST00000618327 STAM2O75886 525 aa15.03■□□□□ -0
CIITA-213ENST00000618327 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
CIITA-213ENST00000618327 ZNF653Q96CK0 615 aa15.03■□□□□ -0
CIITA-213ENST00000618327 MED10Q9BTT4 135 aa15.03■□□□□ -0
CIITA-213ENST00000618327 MAP3K20Q9NYL2 800 aaKnown RBP15.03■□□□□ -0
CIITA-213ENST00000618327 NUB1Q9Y5A7 615 aa15.03■□□□□ -0
CIITA-213ENST00000618327 ZNF157P51786 506 aaPredicted RBP15.02■□□□□ -0
CIITA-213ENST00000618327 VAMP7P51809 220 aa15.02■□□□□ -0
CIITA-213ENST00000618327 PAK2Q13177 524 aa15.02■□□□□ -0
CIITA-213ENST00000618327 ALKBH5Q6P6C2 394 aaKnown RBP15.02■□□□□ -0
CIITA-213ENST00000618327 SEPT1Q8WYJ6 367 aa15.02■□□□□ -0
CIITA-213ENST00000618327 POLR3CQ9BUI4 534 aaPredicted RBP15.02■□□□□ -0
CIITA-213ENST00000618327 C2orf40Q9H1Z8 148 aa15.02■□□□□ -0
CIITA-213ENST00000618327 SMIM23A6NLE4 172 aa15.02■□□□□ -0
CIITA-213ENST00000618327 LRRC53A6NM62 1247 aa15.02■□□□□ -0
CIITA-213ENST00000618327 MESDQ14696 234 aa15.02■□□□□ -0
CIITA-213ENST00000618327 FAM76AQ8TAV0 307 aa15.02■□□□□ -0
CIITA-213ENST00000618327 TSC1Q92574 1164 aa15.02■□□□□ -0
CIITA-213ENST00000618327 ALS2Q96Q42 1657 aa15.02■□□□□ -0
CIITA-213ENST00000618327 PAIP2Q9BPZ3 127 aaKnown RBP15.02■□□□□ -0
CIITA-213ENST00000618327 PITPNM2Q9BZ72 1349 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 GRB10Q13322 594 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 PLCD3Q8N3E9 789 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 TRIM11Q96F44 468 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 MOV10L1Q9BXT6 1211 aaKnown RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 FEZ2Q9UHY8 353 aaPredicted RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 A0A1B0GTH6 734 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 CELF2O95319 508 aaKnown RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 ATP2A2P16615 1042 aaKnown RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 ZSCAN20P17040 1043 aaPredicted RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 HUNKP57058 714 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 ZBTB16Q05516 673 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 FRMD5Q7Z6J6 570 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 GPRC5AQ8NFJ5 357 aa15.02□□□□□ -0.01
CIITA-213ENST00000618327 FAM193BQ96PV7 902 aaPredicted RBP15.02□□□□□ -0.01
CIITA-213ENST00000618327 FGRP09769 529 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 MXRA7P84157 204 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 HADHQ16836 314 aaKnown RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 ZNF568Q3ZCX4 644 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 MKL1Q969V6 931 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 CCDC97Q96F63 343 aaPredicted RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 IQCGQ9H095 443 aaKnown RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 GNAT1P11488 350 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 CD58P19256 250 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 GABPB1Q06547 395 aaPredicted RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 TOGARAM2Q6ZUX3 1019 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 GPRASP2Q96D09 838 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 SAAL1Q96ER3 474 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 RAB20Q9NX57 234 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 TNPO2O14787 897 aaKnown RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 PPP2R5EQ16537 467 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 CAMKK2Q96RR4 588 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 PLEKHA4Q9H4M7 779 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 CCDC160A6NGH7 325 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 NFIBO00712 420 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 GAS8O95995 478 aa15.01□□□□□ -0.01
CIITA-213ENST00000618327 ZNF668Q96K58 619 aaPredicted RBP15.01□□□□□ -0.01
CIITA-213ENST00000618327 A0A1B0GUA9 196 aa15□□□□□ -0.01
CIITA-213ENST00000618327 MOCS3O95396 460 aa15□□□□□ -0.01
CIITA-213ENST00000618327 MYO1EQ12965 1108 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms