RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 FMR1NBQ8N0W7 255 aaPredicted RBP25.24■■□□□ 1.63
CBWD3-213ENST00000618217 XPNPEP1Q9NQW7 623 aa25.24■■□□□ 1.63
CBWD3-213ENST00000618217 DGAT1O75907 488 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 SYKP43405 635 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 FAAP100Q0VG06 881 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 LONRF3Q496Y0 759 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 RINT1Q6NUQ1 792 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 C1orf186Q6ZWK4 172 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 DHX38Q92620 1227 aaKnown RBP25.23■■□□□ 1.63
CBWD3-213ENST00000618217 WNT8BQ93098 351 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 PYM1Q9BRP8 204 aaKnown RBP25.23■■□□□ 1.63
CBWD3-213ENST00000618217 RUSC1Q9BVN2 902 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 CUEDC2Q9H467 287 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 ACTN4O43707 911 aaKnown RBP25.23■■□□□ 1.63
CBWD3-213ENST00000618217 CYP11B2P19099 503 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 PTK7Q13308 1070 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 ARSHQ5FYA8 562 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 EFCAB12Q6NXP0 572 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 EXOC8Q8IYI6 725 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 CCDC43Q96MW1 224 aaKnown RBP25.23■■□□□ 1.63
CBWD3-213ENST00000618217 MTRQ99707 1265 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 KBTBD4Q9NVX7 518 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 ATP11BQ9Y2G3 1177 aa25.23■■□□□ 1.63
CBWD3-213ENST00000618217 DCDC2CA8MYV0 355 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 ZNF202O95125 648 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 SLFN14P0C7P3 912 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 CYP2C9P11712 490 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 LIG1P18858 919 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 POLGP54098 1239 aaPredicted RBP25.22■■□□□ 1.63
CBWD3-213ENST00000618217 FAM160A1Q05DH4 1040 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 EMC2Q15006 297 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 TRIM71Q2Q1W2 868 aaKnown RBP25.22■■□□□ 1.63
CBWD3-213ENST00000618217 KIAA0319LQ8IZA0 1049 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 SLC7A3Q8WY07 619 aa25.22■■□□□ 1.63
CBWD3-213ENST00000618217 SMIM35A0A1B0GVV1 85 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 USO1O60763 962 aaKnown RBP25.21■■□□□ 1.63
CBWD3-213ENST00000618217 DRP2Q13474 957 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 TAF2Q6P1X5 1199 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 LRRC71Q8N4P6 559 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 RETREG2Q8NC44 543 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 USP25Q9UHP3 1055 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 SERTAD1Q9UHV2 236 aa25.21■■□□□ 1.63
CBWD3-213ENST00000618217 TLR3O15455 904 aaKnown RBP25.2■■□□□ 1.62
CBWD3-213ENST00000618217 SSBP05455 408 aaKnown RBP eCLIP25.2■■□□□ 1.62
CBWD3-213ENST00000618217 CLCN3P51790 818 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 DHX8Q14562 1220 aaKnown RBP25.2■■□□□ 1.62
CBWD3-213ENST00000618217 SV2BQ7L1I2 683 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 RPAINQ86UA6 219 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 METTL13Q8N6R0 699 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 JPH2Q9BR39 696 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-213ENST00000618217 SUGCTQ9HAC7 445 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 ATP6V0A4Q9HBG4 840 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 BMP2KQ9NSY1 1161 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-213ENST00000618217 KCND2Q9NZV8 630 aa25.2■■□□□ 1.62
CBWD3-213ENST00000618217 GOLGA6L22H0YM25 854 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 GAS2O43903 313 aaKnown RBP25.19■■□□□ 1.62
CBWD3-213ENST00000618217 GUCY2CP25092 1073 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 GPBP1Q86WP2 473 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 MAGEF1Q9HAY2 307 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 NOD1Q9Y239 953 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 NR1I2O75469 434 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 MCM4P33991 863 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 MCPH1Q8NEM0 835 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 DNAJB3Q8WWF6 145 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 TMEM143Q96AN5 459 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 TNMDQ9H2S6 317 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 TBX21Q9UL17 535 aa25.19■■□□□ 1.62
CBWD3-213ENST00000618217 MYMKA6NI61 221 aa25.18■■□□□ 1.62
CBWD3-213ENST00000618217 RBL2Q08999 1139 aa25.18■■□□□ 1.62
CBWD3-213ENST00000618217 KRBA2Q6ZNG9 492 aa25.18■■□□□ 1.62
CBWD3-213ENST00000618217 STAMQ92783 540 aa25.18■■□□□ 1.62
CBWD3-213ENST00000618217 NPHP3-ACAD11A0A0J9YXS1 232 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 CLTBP09497 229 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 TMOD1P28289 359 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 ARL2P36404 184 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 MAPK7Q13164 816 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 IER5Q5VY09 327 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 SH3RF1Q7Z6J0 888 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 CEP57L1Q8IYX8 460 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 DAW1Q8N136 415 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 HTATIP2Q9BUP3 242 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 FAM49AQ9H0Q0 323 aaPredicted RBP25.17■■□□□ 1.62
CBWD3-213ENST00000618217 GPRC5CQ9NQ84 441 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 MYH11P35749 1972 aa25.17■■□□□ 1.62
CBWD3-213ENST00000618217 MAEAQ7L5Y9 396 aa25.16■■□□□ 1.62
CBWD3-213ENST00000618217 NME8Q8N427 588 aa25.16■■□□□ 1.62
CBWD3-213ENST00000618217 PAGE5Q96GU1 130 aa25.16■■□□□ 1.62
CBWD3-213ENST00000618217 NOC4LQ9BVI4 516 aaKnown RBP25.16■■□□□ 1.62
CBWD3-213ENST00000618217 TIPINQ9BVW5 301 aa25.16■■□□□ 1.62
CBWD3-213ENST00000618217 POLD4Q9HCU8 107 aa25.16■■□□□ 1.62
CBWD3-213ENST00000618217 SUCLA2Q9P2R7 463 aaPredicted RBP25.16■■□□□ 1.62
CBWD3-213ENST00000618217 DNM2P50570 870 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 GIT2Q14161 759 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 CNNM4Q6P4Q7 775 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 TCP11Q8WWU5 503 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 PRPF31Q8WWY3 499 aaKnown RBP25.15■■□□□ 1.62
CBWD3-213ENST00000618217 DDX12PQ92771 950 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 DNAJC19Q96DA6 116 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 TIGD1Q96MW7 591 aa25.15■■□□□ 1.62
CBWD3-213ENST00000618217 REEP2Q9BRK0 252 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms