RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 C11orf84Q9BUA3 381 aaPredicted RBP25.08■■□□□ 1.61
NEDD4L-237ENST00000617539 SLKQ9H2G2 1235 aaPredicted RBP25.08■■□□□ 1.61
NEDD4L-237ENST00000617539 RWDD3Q9Y3V2 267 aa25.08■■□□□ 1.61
NEDD4L-237ENST00000617539 PLXNA4Q9HCM2 1894 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 SLC37A4O43826 429 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 CDKL5O76039 1030 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 STBD1O95210 358 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 SARSP49591 514 aaKnown RBP25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 COL19A1Q14993 1142 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 NONOQ15233 471 aaKnown RBP eCLIP25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 PAN2Q504Q3 1202 aaKnown RBP25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 MOXD1Q6UVY6 613 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 LRRC71Q8N4P6 559 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 ADAM2Q99965 735 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 RGS18Q9NS28 235 aa25.07■■□□□ 1.6
NEDD4L-237ENST00000617539 MAGEB2O15479 319 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 STAG3L1P0CL83 205 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 KCNA5P22460 613 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 TARBP2Q15633 366 aaKnown RBP25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 EFCAB12Q6NXP0 572 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 KRT25Q7Z3Z0 450 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 OXER1Q8TDS5 423 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 ADAMTS10Q9H324 1103 aa25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 NSUN3Q9H649 340 aaKnown RBP25.06■■□□□ 1.6
NEDD4L-237ENST00000617539 C5orf42Q9H799 3197 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 TMEM150BA6NC51 233 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 C9IYK1 514 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 LARGE1O95461 756 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 CAMK1Q14012 370 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 LEXMQ3ZCV2 418 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 MIER3Q7Z3K6 550 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 RDM1Q8NG50 284 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 CEP89Q96ST8 783 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 PLVAPQ9BX97 442 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 NRBP2Q9NSY0 501 aa25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 DDX25Q9UHL0 483 aaKnown RBP25.05■■□□□ 1.6
NEDD4L-237ENST00000617539 DENND3A2RUS2 1198 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 GPR182O15218 404 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 IBSPP21815 317 aaPredicted RBP25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 NLRP11P59045 1033 aaKnown RBP25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 DSC3Q14574 896 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 LMAN2LQ9H0V9 348 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 ALG13Q9NP73 1137 aaKnown RBP25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 PLAGL2Q9UPG8 496 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 AKT3Q9Y243 479 aa25.04■■□□□ 1.6
NEDD4L-237ENST00000617539 MMP1P03956 469 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 FDPSP14324 419 aaKnown RBP25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 DNAJB1P25685 340 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 DRP2Q13474 957 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 LETM2Q2VYF4 491 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 FAM43BQ6ZT52 329 aaPredicted RBP25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 SLC24A5Q71RS6 500 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 NECAB1Q8N987 351 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 NEK9Q8TD19 979 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 P2RX5Q93086 422 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 ZNF668Q96K58 619 aaPredicted RBP25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 NIFKQ9BYG3 293 aaKnown RBP25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 C1orf112Q9NSG2 853 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 VAV3Q9UKW4 847 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 LRFN2Q9ULH4 789 aa25.03■■□□□ 1.6
NEDD4L-237ENST00000617539 ITGB1P05556 798 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 ME3Q16798 604 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 EARS2Q5JPH6 523 aaKnown RBP25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 ODR4Q5SWX8 454 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 FAM102BQ5T8I3 360 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 PABPC5Q96DU9 382 aaKnown RBP25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 MAP7D2Q96T17 732 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 SH2D3AQ9BRG2 576 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 KCNMB3Q9NPA1 279 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 HCSTQ9UBK5 93 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 SEPT9Q9UHD8 586 aaPredicted RBP25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 PCDHB7Q9Y5E2 793 aa25.02■■□□□ 1.6
NEDD4L-237ENST00000617539 CCDC194A0A1B0GVG4 234 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 FAM205CA6NFA0 338 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 H3BQ06 376 aaPredicted RBP25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 EML1O00423 815 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 CSPG5O95196 566 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 SEC24BO95487 1268 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 TMOD1P28289 359 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 GPC3P51654 580 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 FAM189BP81408 668 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 TBC1D8BQ0IIM8 1120 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 HYAL1Q12794 435 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 ANKRD1Q15327 319 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 NEK8Q86SG6 692 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 KLHL23Q8NBE8 558 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 CD320Q9NPF0 282 aa25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 ORC3Q9UBD5 711 aaPredicted RBP25.01■■□□□ 1.59
NEDD4L-237ENST00000617539 EIF4BP23588 611 aaKnown RBP25■■□□□ 1.59
NEDD4L-237ENST00000617539 LTBRP36941 435 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 MTERF2Q49AM1 385 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 XKR3Q5GH77 459 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 PPP4R3AQ6IN85 833 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 SPPL3Q8TCT6 385 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 KHSRPQ92945 711 aaKnown RBP eCLIP25■■□□□ 1.59
NEDD4L-237ENST00000617539 GTF3C6Q969F1 213 aa25■■□□□ 1.59
NEDD4L-237ENST00000617539 IGKV6-21A0A0C4DH24 114 aa24.99■■□□□ 1.59
NEDD4L-237ENST00000617539 FGFR1P11362 822 aa24.99■■□□□ 1.59
NEDD4L-237ENST00000617539 IL9P15248 144 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms