RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PLAGL2Q9UPG8 496 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 RNF40O75150 1001 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 UCHL3P15374 230 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 KCNK18Q7Z418 384 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 UHMK1Q8TAS1 419 aaKnown RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 DUSP9Q99956 384 aaKnown RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 ST7Q9NRC1 585 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 STIM2Q9P246 746 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 SFNP31947 248 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 BPIFB4P59827 614 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAM198AQ9UFP1 575 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 TMX2Q9Y320 296 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 BCL9LQ86UU0 1499 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 SSU72P8A0A1W2PR75 194 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 GAS8O95995 478 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 MARK3P27448 753 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 YWHABP31946 246 aaKnown RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 STXBP2Q15833 593 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 C10orf67Q8IYJ2 551 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 OTUD6BQ8N6M0 293 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 MCPH1Q8NEM0 835 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 MXRA8Q9BRK3 442 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 INTS2Q9H0H0 1204 aaKnown RBP14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 PCDHA10Q9Y5I2 948 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 PSMC6P62333 389 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 AGBL3Q8NEM8 1001 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 DNAJC7Q99615 494 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 RUSC1Q9BVN2 902 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 MAK16Q9BXY0 300 aaKnown RBP14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 TRIM6Q9C030 488 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 KCNH7Q9NS40 1196 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 SNX12Q9UMY4 172 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 A0A1W2PQJ5 194 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 SLC18A3Q16572 532 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 NBPF9Q3BBW0 867 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 MOXD1Q6UVY6 613 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZNF746Q6NUN9 644 aaPredicted RBP14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 TRIM65Q6PJ69 517 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 MRRFQ96E11 262 aaKnown RBP14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 MTMR9Q96QG7 549 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 C5P01031 1676 aa14.28□□□□□ -0.12
PPP4R3B-206ENST00000616407 SLC26A4O43511 780 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 TNNC2P02585 160 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 MAPK4P31152 587 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 GNGT1P63211 74 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 DENND2CQ68D51 928 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAM213AQ9BRX8 229 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 FEZ2Q9UHY8 353 aaPredicted RBP14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 DAAM1Q9Y4D1 1078 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 GOLGA8KD6RF30 607 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 FDX1P10109 184 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 CXCL9Q07325 125 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 DMTNQ08495 405 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 TERF2Q15554 542 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 SPATA20Q8TB22 786 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 LACRTQ9GZZ8 138 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 PTPN22Q9Y2R2 807 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 ALS2Q96Q42 1657 aa14.27□□□□□ -0.12
PPP4R3B-206ENST00000616407 LRRC10BA6NIK2 292 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 FGGP02679 453 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 ARP10275 920 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 OSTNP61366 133 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 GIT2Q14161 759 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 TTC19Q6DKK2 380 aaPredicted RBP14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 NOA1Q8NC60 698 aaKnown RBP14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 ACAD9Q9H845 621 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATP6V0A4Q9HBG4 840 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 IFNB1P01574 187 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 TFAMQ00059 246 aaKnown RBP14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 COG2Q14746 738 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 MAIP1Q8WWC4 291 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 RIT2Q99578 217 aa14.27□□□□□ -0.13
PPP4R3B-206ENST00000616407 TRPM3Q9HCF6 1732 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 ESYT3A0FGR9 886 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 NR3C2P08235 984 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 TMOD1P28289 359 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 LACTBP83111 547 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 C4orf32Q8N8J7 132 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms