RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	DNAJC21	Q5F1R6	531 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ODR4	Q5SWX8	454 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	BTNL9	Q6UXG8	535 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SLC35C1	Q96A29	364 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CALR3	Q96L12	384 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	STIM2	Q9P246	746 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TMX2	Q9Y320	296 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SAMM50	Q9Y512	469 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GRID2IP	A4D2P6	1211 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GOLGA6B	A6NDN3	693 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PRLR	P16471	622 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GUCY2D	Q02846	1103 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ALKBH5	Q6P6C2	394 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FOXR2	Q6PJQ5	311 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FAM178B	Q8IXR5	827 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FAM186B	Q8IYM0	893 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	C7orf43	Q8WVR3	580 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	POLR3C	Q9BUI4	534 aa	Predicted RBP	15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	UNC45A	Q9H3U1	944 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RABEP2	Q9H5N1	569 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PARVG	Q9HBI0	331 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GLI1	P08151	1106 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	HOXA7	P31268	230 aa	Predicted RBP	15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MTA1	Q13330	715 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EPHA7	Q15375	998 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TRADD	Q15628	312 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MCTP2	Q6DN12	878 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	LEKR1	Q6ZMV7	388 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SYCP3	Q8IZU3	236 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	U2AF1L4	Q8WU68	220 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PCIF1	Q9H4Z3	704 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EPB41L5	Q9HCM4	733 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MED4	Q9NPJ6	270 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PSMD10	O75832	226 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GUCY2F	P51841	1108 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PRELP	P51888	382 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PPARD	Q03181	441 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ARHGAP44	Q17R89	818 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CEP55	Q53EZ4	464 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	LDHD	Q86WU2	507 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	HERC5	Q9UII4	1024 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	NFU1	Q9UMS0	254 aa		15.16	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AGPS	O00116	658 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	HEXIM1	O94992	359 aa	Known RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CYP3A4	P08684	503 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CARS	P49589	748 aa	Known RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RSBN1L	Q6PCB5	846 aa	Predicted RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FOXR1	Q6PIV2	292 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	C1orf186	Q6ZWK4	172 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CHURC1	Q8WUH1	139 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TAF4B	Q92750	862 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	LXN	Q9BS40	222 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	NAGPA	Q9UK23	515 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ATRNL1	Q5VV63	1379 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SHTN1	A0MZ66	631 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TISP43	B9A030	160 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ABCB4	P21439	1286 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EN1	Q05925	392 aa	Predicted RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MEI1	Q5TIA1	1274 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TTC19	Q6DKK2	380 aa	Predicted RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ANKRD23	Q86SG2	305 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZC3H3	Q8IXZ2	948 aa	Known RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TSEN2	Q8NCE0	465 aa	Known RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AFAP1L1	Q8TED9	768 aa		15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AEN	Q8WTP8	325 aa	Known RBP	15.15	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TMEM150B	A6NC51	233 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	PIK3CD	O00329	1044 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	IPO5	O00410	1097 aa	Known RBP	15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	CEP104	O60308	925 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	NPM3	O75607	178 aa	Known RBP	15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	FAM151A	Q8WW52	585 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	AP1M1	Q9BXS5	423 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	VIPAS39	Q9H9C1	493 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	PSMC2	P35998	433 aa	Known RBP	15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	RPS6KA1	Q15418	735 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	DPY19L2P1	Q6NXN4	242 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	WDR11	Q9BZH6	1224 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	METTL14	Q9HCE5	456 aa	Known RBP	15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	SIX2	Q9NPC8	291 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	CCPG1	Q9ULG6	757 aa		15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	MRPL11	Q9Y3B7	192 aa	Known RBP	15.14	■□□□□ 0.01
CACNA1C-231	ENST00000616390	ZMYM2	Q9UBW7	1377 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	ARHGEF35	A5YM69	484 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	PPP1R12B	O60237	982 aa	Predicted RBP	15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	EXOC3	O60645	756 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	FAM153B	P0C7A2	387 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	ACTN2	P35609	894 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	FAM153C	Q494X1	144 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	CBWD6	Q4V339	395 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	CBWD3	Q5JTY5	395 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	CBWD5	Q5RIA9	395 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	GLYCTK	Q8IVS8	523 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	HOOK2	Q96ED9	719 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	VCPKMT	Q9H867	229 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	TUFT1	Q9NNX1	390 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	FAM153A	Q9UHL3	310 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	ZC3H4	Q9UPT8	1303 aa	Known RBP	15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	NFIB	O00712	420 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	LRRN2	O75325	713 aa		15.13	■□□□□ 0.01
CACNA1C-231	ENST00000616390	INPP5B	P32019	993 aa		15.13	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms