RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
CDX1-202ENST00000616154 PDRG1Q9NUG6 133 aa21.45■■□□□ 1.02
CDX1-202ENST00000616154 TCEAL9Q9UHQ7 104 aa21.45■■□□□ 1.02
CDX1-202ENST00000616154 ST3GAL5Q9UNP4 418 aa21.45■■□□□ 1.02
CDX1-202ENST00000616154 PCDHB7Q9Y5E2 793 aa21.45■■□□□ 1.02
CDX1-202ENST00000616154 PCDHA10Q9Y5I2 948 aa21.45■■□□□ 1.02
CDX1-202ENST00000616154 DENND3A2RUS2 1198 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 GPR182O15218 404 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 LINC01565O15544 149 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 DCXO43602 365 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 CRYBB1P53674 252 aaPredicted RBP21.44■■□□□ 1.02
CDX1-202ENST00000616154 CLUL1Q15846 466 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 PRR16Q569H4 304 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 SLC24A5Q71RS6 500 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 CCDC148Q8NFR7 591 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 POF1BQ8WVV4 589 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 LENG9Q96B70 501 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 SH3GLB2Q9NR46 395 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 CD207Q9UJ71 328 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 CEP131Q9UPN4 1083 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 MUC6Q6W4X9 2439 aa21.44■■□□□ 1.02
CDX1-202ENST00000616154 C9IYK1 514 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 IRS1P35568 1242 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 CCT2P78371 535 aaKnown RBP21.43■■□□□ 1.02
CDX1-202ENST00000616154 AKAP17AQ02040 695 aaKnown RBP21.43■■□□□ 1.02
CDX1-202ENST00000616154 KIZQ2M2Z5 673 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 FAM228AQ86W67 206 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 EFHBQ8N7U6 833 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 RASGRP4Q8TDF6 673 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 POP1Q99575 1024 aaKnown RBP21.43■■□□□ 1.02
CDX1-202ENST00000616154 OSMRQ99650 979 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 GABBR1Q9UBS5 961 aa21.43■■□□□ 1.02
CDX1-202ENST00000616154 GPR32O75388 356 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 SEC24BO95487 1268 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 IBSPP21815 317 aaPredicted RBP21.42■■□□□ 1.02
CDX1-202ENST00000616154 ADGRD2Q7Z7M1 963 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 METTL13Q8N6R0 699 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 MSLNLQ96KJ4 702 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 FAM167AQ96KS9 214 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 SLC26A6Q9BXS9 759 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 AAASQ9NRG9 546 aa21.42■■□□□ 1.02
CDX1-202ENST00000616154 TBKBP1A7MCY6 615 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 WDR64B1ANS9 1081 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 MAGEB2O15479 319 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 VTNP04004 478 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 NDUFV1P49821 464 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 UBE3AQ05086 875 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 FAM102BQ5T8I3 360 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 LINC01465Q8N7H1 131 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 PPP1R16BQ96T49 567 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 TMEM161AQ9NX61 479 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 PCDHB12Q9Y5F1 795 aa21.41■■□□□ 1.02
CDX1-202ENST00000616154 EYA4O95677 639 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 FAM189BP81408 668 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 DSC3Q14574 896 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 TRIM22Q8IYM9 498 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 ELAC1Q9H777 363 aaKnown RBP21.4■■□□□ 1.02
CDX1-202ENST00000616154 CLEC1BQ9P126 229 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 SAMM50Q9Y512 469 aa21.4■■□□□ 1.02
CDX1-202ENST00000616154 MSH4O15457 936 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 EDIL3O43854 480 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 DEXIO95424 95 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 NRIP1P48552 1158 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 USP11P51784 963 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 CLCN3P51790 818 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 SPOUT1Q5T280 376 aaKnown RBP21.39■■□□□ 1.01
CDX1-202ENST00000616154 TRMT1LQ7Z2T5 733 aaKnown RBP21.39■■□□□ 1.01
CDX1-202ENST00000616154 ZNF710Q8N1W2 664 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 MAP7D2Q96T17 732 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 RIT2Q99578 217 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 ATP6V0A4Q9HBG4 840 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 DISC1Q9NRI5 854 aa21.39■■□□□ 1.01
CDX1-202ENST00000616154 CPLX1O14810 134 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 ZNF862O60290 1169 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 PFKFB2O60825 505 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 PPFIA3O75145 1194 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 OATP04181 439 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
CDX1-202ENST00000616154 SSRP1Q08945 709 aaKnown RBP21.38■■□□□ 1.01
CDX1-202ENST00000616154 COASYQ13057 564 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 ANKRD1Q15327 319 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 EFCAB12Q6NXP0 572 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 CPLX2Q6PUV4 134 aaKnown RBP21.38■■□□□ 1.01
CDX1-202ENST00000616154 SLC5A5Q92911 643 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 TYW1Q9NV66 732 aaKnown RBP21.38■■□□□ 1.01
CDX1-202ENST00000616154 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 AKT3Q9Y243 479 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 PCDHGC5Q9Y5F6 944 aa21.38■■□□□ 1.01
CDX1-202ENST00000616154 FGF18O76093 207 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 GLP2RO95838 553 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 FGFR1P11362 822 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 TMOD1P28289 359 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 NLRP11P59045 1033 aaKnown RBP21.37■■□□□ 1.01
CDX1-202ENST00000616154 PRKCEQ02156 737 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 SCRN1Q12765 414 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 NPY5RQ15761 445 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 COLGALT1Q8NBJ5 622 aa21.37■■□□□ 1.01
CDX1-202ENST00000616154 DAGLBQ8NCG7 672 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms