RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PCDHA5Q9Y5H7 936 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 GRIN2DO15399 1336 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 BIN1O00499 593 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 NOP56O00567 594 aaKnown RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 TIMP1P01033 207 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 CD4P01730 458 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 OATP04181 439 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 SSBP05455 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 MARK3P27448 753 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 YWHABP31946 246 aaKnown RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 SARSP49591 514 aaKnown RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 RARRES1P49788 294 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 EPHB4P54760 987 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 ITGA7Q13683 1181 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 C9orf50Q5SZB4 431 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 TRMT1LQ7Z2T5 733 aaKnown RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 GPBP1Q86WP2 473 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 SYT2Q8N9I0 419 aaPredicted RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 SPATA20Q8TB22 786 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 PPP1R13LQ8WUF5 828 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 C16orf70Q9BSU1 422 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 TRIM9Q9C026 710 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 MAGEF1Q9HAY2 307 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 POLD4Q9HCU8 107 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 DBR1Q9UK59 544 aaKnown RBP8.95□□□□□ -0.98
PCDH9-205ENST00000614931 MAN1B1Q9UKM7 699 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 DNM3Q9UQ16 869 aa8.95□□□□□ -0.98
PCDH9-205ENST00000614931 A6NJR5 290 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 RSPH10B2B2RC85 870 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ZBTB42B2RXF5 422 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 TLR3O15455 904 aaKnown RBP8.94□□□□□ -0.98
PCDH9-205ENST00000614931 USO1O60763 962 aaKnown RBP8.94□□□□□ -0.98
PCDH9-205ENST00000614931 RSPH10BP0C881 870 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 BMP6P22004 513 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 CPT1AP50416 773 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 STAT5BP51692 787 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ZNF445P59923 1031 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ASIC1P78348 528 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 FPGSQ05932 587 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 RAD51AP2Q09MP3 1159 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 MAPK7Q13164 816 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 PLCB4Q15147 1175 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 NT5DC1Q5TFE4 455 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 FAM160B1Q5W0V3 765 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 FAM109BQ6ICB4 259 aaPredicted RBP8.94□□□□□ -0.98
PCDH9-205ENST00000614931 MFSD5Q6N075 450 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 RINT1Q6NUQ1 792 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 KANK3Q6NY19 840 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 CNNM4Q6P4Q7 775 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 C1orf186Q6ZWK4 172 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 DYMQ7RTS9 669 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 GAS2L3Q86XJ1 694 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 DAW1Q8N136 415 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 DDX12PQ92771 950 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 KAT2BQ92831 832 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 FGFBP2Q9BYJ0 223 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 XPNPEP1Q9NQW7 623 aa8.94□□□□□ -0.98
PCDH9-205ENST00000614931 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
PCDH9-205ENST00000614931 SEPT9Q9UHD8 586 aaPredicted RBP8.94□□□□□ -0.98
PCDH9-205ENST00000614931 ARHGEF35A5YM69 484 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 KPNA6O60684 536 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 RPN1P04843 607 aaKnown RBP8.93□□□□□ -0.98
PCDH9-205ENST00000614931 PURAQ00577 322 aaKnown RBP8.93□□□□□ -0.98
PCDH9-205ENST00000614931 TYRO3Q06418 890 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 EHHADHQ08426 723 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 COASYQ13057 564 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 MORC3Q14149 939 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 GIT2Q14161 759 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 TARBP2Q15633 366 aaKnown RBP8.93□□□□□ -0.98
PCDH9-205ENST00000614931 MTERF2Q49AM1 385 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 XKR3Q5GH77 459 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-205ENST00000614931 PLPPR4Q7Z2D5 763 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 DEFB123Q8N688 67 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 ATP8B4Q8TF62 1192 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 TRAPPC12Q8WVT3 735 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 GLG1Q92896 1179 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 HPS3Q969F9 1004 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 SMARCE1Q969G3 411 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 ZBTB10Q96DT7 871 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 REEP2Q9BRK0 252 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 MTG1Q9BT17 334 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-205ENST00000614931 RNPEPQ9H4A4 650 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 ANKEF1Q9NU02 776 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 MTMR10Q9NXD2 777 aa8.93□□□□□ -0.98
PCDH9-205ENST00000614931 FRMD3A2A2Y4 597 aa8.92□□□□□ -0.98
PCDH9-205ENST00000614931 RBAK-RBAKDNI3L0D1 243 aa8.92□□□□□ -0.98
PCDH9-205ENST00000614931 HAS3O00219 553 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms